Gene : Cagra.9562s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31421:SF2 - PROTEIN BASIC PENTACYSTEINE6 Genomic Order:  1
Name:  ? Cagra.9562s0001 Secondary Identifier:  ? PAC:28899630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9562s0001 0.5kb upstream 0.5kb upstream 2774 true Scaffold9562: 28-2801 Capsella grandiflora
Cagra.9562s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold9562: 2302-2801 Capsella grandiflora
Cagra.9562s0001 0.5kb downstream 0.5kb downstream 2301 true Scaffold9562: 1-2301 Capsella grandiflora
Cagra.9562s0001 0.5kb downstream 0.5kb downstream 27 false Scaffold9562: 1-27 Capsella grandiflora
Cagra.9562s0001 1.0kb upstream 1.0kb upstream 3274 true Scaffold9562: 28-3301 Capsella grandiflora
Cagra.9562s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold9562: 2302-3301 Capsella grandiflora
Cagra.9562s0001 1.0kb downstream 1.0kb downstream 2301 true Scaffold9562: 1-2301 Capsella grandiflora
Cagra.9562s0001 1.0kb downstream 1.0kb downstream 27 false Scaffold9562: 1-27 Capsella grandiflora
Cagra.9562s0001 2.0kb upstream 2.0kb upstream 4274 true Scaffold9562: 28-4301 Capsella grandiflora
Cagra.9562s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold9562: 2302-4301 Capsella grandiflora
Cagra.9562s0001 2.0kb downstream 2.0kb downstream 2301 true Scaffold9562: 1-2301 Capsella grandiflora
Cagra.9562s0001 2.0kb downstream 2.0kb downstream 27 false Scaffold9562: 1-27 Capsella grandiflora
Cagra.9562s0001 5.0kb upstream 5.0kb upstream 7189 true Scaffold9562: 28-7216 Capsella grandiflora
Cagra.9562s0001 5.0kb upstream 5.0kb upstream 4915 false Scaffold9562: 2302-7216 Capsella grandiflora
Cagra.9562s0001 5.0kb downstream 5.0kb downstream 2301 true Scaffold9562: 1-2301 Capsella grandiflora
Cagra.9562s0001 5.0kb downstream 5.0kb downstream 27 false Scaffold9562: 1-27 Capsella grandiflora
Cagra.9562s0001 10.0kb upstream 10.0kb upstream 7189 true Scaffold9562: 28-7216 Capsella grandiflora
Cagra.9562s0001 10.0kb upstream 10.0kb upstream 4915 false Scaffold9562: 2302-7216 Capsella grandiflora
Cagra.9562s0001 10.0kb downstream 10.0kb downstream 2301 true Scaffold9562: 1-2301 Capsella grandiflora
Cagra.9562s0001 10.0kb downstream 10.0kb downstream 27 false Scaffold9562: 1-27 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377117 5261 Brassicaceae View MSA
123832274 5264 Brassicales-Malvales View MSA
124346918 5266 SBM View MSA
124238071 5268 Malvidae View MSA
124066986 5270 Rosid View MSA
123743599 5271 Pentapetalae View MSA
122787998 5272 Eudicot View MSA
122045937 5273 Angiosperm View MSA
121350358 5274 Embryophyte View MSA
123381694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain