Gene : Cagra.9598s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR30060 - INNER MEMBRANE PROTEIN Genomic Order:  4
Name:  ? Cagra.9598s0004 Secondary Identifier:  ? PAC:28898670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9598s0004 0.5kb upstream 0.5kb upstream 2100 true Scaffold9598: 11197-13296 Capsella grandiflora
Cagra.9598s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9598: 12797-13296 Capsella grandiflora
Cagra.9598s0004 0.5kb downstream 0.5kb downstream 2100 true Scaffold9598: 10697-12796 Capsella grandiflora
Cagra.9598s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9598: 10697-11196 Capsella grandiflora
Cagra.9598s0004 1.0kb upstream 1.0kb upstream 2600 true Scaffold9598: 11197-13796 Capsella grandiflora
Cagra.9598s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9598: 12797-13796 Capsella grandiflora
Cagra.9598s0004 1.0kb downstream 1.0kb downstream 2600 true Scaffold9598: 10197-12796 Capsella grandiflora
Cagra.9598s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9598: 10197-11196 Capsella grandiflora
Cagra.9598s0004 2.0kb upstream 2.0kb upstream 3600 true Scaffold9598: 11197-14796 Capsella grandiflora
Cagra.9598s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9598: 12797-14796 Capsella grandiflora
Cagra.9598s0004 2.0kb downstream 2.0kb downstream 3600 true Scaffold9598: 9197-12796 Capsella grandiflora
Cagra.9598s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9598: 9197-11196 Capsella grandiflora
Cagra.9598s0004 5.0kb upstream 5.0kb upstream 6600 true Scaffold9598: 11197-17796 Capsella grandiflora
Cagra.9598s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9598: 12797-17796 Capsella grandiflora
Cagra.9598s0004 5.0kb downstream 5.0kb downstream 6600 true Scaffold9598: 6197-12796 Capsella grandiflora
Cagra.9598s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold9598: 6197-11196 Capsella grandiflora
Cagra.9598s0004 10.0kb upstream 10.0kb upstream 11600 true Scaffold9598: 11197-22796 Capsella grandiflora
Cagra.9598s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold9598: 12797-22796 Capsella grandiflora
Cagra.9598s0004 10.0kb downstream 10.0kb downstream 11600 true Scaffold9598: 1197-12796 Capsella grandiflora
Cagra.9598s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold9598: 1197-11196 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502916 5273 Angiosperm View MSA
122343925 5261 Brassicaceae View MSA
123784007 5264 Brassicales-Malvales View MSA
124282209 5266 SBM View MSA
124136849 5268 Malvidae View MSA
123864643 5270 Rosid View MSA
123449937 5271 Pentapetalae View MSA
122485464 5272 Eudicot View MSA
120776212 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain