Gene : Cagra.9380s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11972:SF69 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN F-RELATED Genomic Order:  4
Name:  ? Cagra.9380s0004 Secondary Identifier:  ? PAC:28901424
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9380s0004 0.5kb upstream 0.5kb upstream 5300 true Scaffold9380: 16568-21867 Capsella grandiflora
Cagra.9380s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9380: 16568-17067 Capsella grandiflora
Cagra.9380s0004 0.5kb downstream 0.5kb downstream 5300 true Scaffold9380: 17068-22367 Capsella grandiflora
Cagra.9380s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9380: 21868-22367 Capsella grandiflora
Cagra.9380s0004 1.0kb upstream 1.0kb upstream 5800 true Scaffold9380: 16068-21867 Capsella grandiflora
Cagra.9380s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9380: 16068-17067 Capsella grandiflora
Cagra.9380s0004 1.0kb downstream 1.0kb downstream 5800 true Scaffold9380: 17068-22867 Capsella grandiflora
Cagra.9380s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9380: 21868-22867 Capsella grandiflora
Cagra.9380s0004 2.0kb upstream 2.0kb upstream 6800 true Scaffold9380: 15068-21867 Capsella grandiflora
Cagra.9380s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9380: 15068-17067 Capsella grandiflora
Cagra.9380s0004 2.0kb downstream 2.0kb downstream 6800 true Scaffold9380: 17068-23867 Capsella grandiflora
Cagra.9380s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9380: 21868-23867 Capsella grandiflora
Cagra.9380s0004 5.0kb upstream 5.0kb upstream 9800 true Scaffold9380: 12068-21867 Capsella grandiflora
Cagra.9380s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9380: 12068-17067 Capsella grandiflora
Cagra.9380s0004 5.0kb downstream 5.0kb downstream 7541 true Scaffold9380: 17068-24608 Capsella grandiflora
Cagra.9380s0004 5.0kb downstream 5.0kb downstream 2741 false Scaffold9380: 21868-24608 Capsella grandiflora
Cagra.9380s0004 10.0kb upstream 10.0kb upstream 14800 true Scaffold9380: 7068-21867 Capsella grandiflora
Cagra.9380s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold9380: 7068-17067 Capsella grandiflora
Cagra.9380s0004 10.0kb downstream 10.0kb downstream 7541 true Scaffold9380: 17068-24608 Capsella grandiflora
Cagra.9380s0004 10.0kb downstream 10.0kb downstream 2741 false Scaffold9380: 21868-24608 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369235 5261 Brassicaceae View MSA
123841230 5264 Brassicales-Malvales View MSA
124340027 5266 SBM View MSA
124252375 5268 Malvidae View MSA
124068511 5270 Rosid View MSA
123750784 5271 Pentapetalae View MSA
122788657 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain