Gene : Cagra.8996s0014 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10052//PTHR10052:SF9 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  14
Name:  ? Cagra.8996s0014 Secondary Identifier:  ? PAC:28920229
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8996s0014 0.5kb upstream 0.5kb upstream 1702 true Scaffold8996: 37433-39134 Capsella grandiflora
Cagra.8996s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold8996: 38635-39134 Capsella grandiflora
Cagra.8996s0014 0.5kb downstream 0.5kb downstream 1702 true Scaffold8996: 36933-38634 Capsella grandiflora
Cagra.8996s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold8996: 36933-37432 Capsella grandiflora
Cagra.8996s0014 1.0kb upstream 1.0kb upstream 2202 true Scaffold8996: 37433-39634 Capsella grandiflora
Cagra.8996s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold8996: 38635-39634 Capsella grandiflora
Cagra.8996s0014 1.0kb downstream 1.0kb downstream 2202 true Scaffold8996: 36433-38634 Capsella grandiflora
Cagra.8996s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold8996: 36433-37432 Capsella grandiflora
Cagra.8996s0014 2.0kb upstream 2.0kb upstream 3202 true Scaffold8996: 37433-40634 Capsella grandiflora
Cagra.8996s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold8996: 38635-40634 Capsella grandiflora
Cagra.8996s0014 2.0kb downstream 2.0kb downstream 3202 true Scaffold8996: 35433-38634 Capsella grandiflora
Cagra.8996s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold8996: 35433-37432 Capsella grandiflora
Cagra.8996s0014 5.0kb upstream 5.0kb upstream 6202 true Scaffold8996: 37433-43634 Capsella grandiflora
Cagra.8996s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold8996: 38635-43634 Capsella grandiflora
Cagra.8996s0014 5.0kb downstream 5.0kb downstream 6202 true Scaffold8996: 32433-38634 Capsella grandiflora
Cagra.8996s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold8996: 32433-37432 Capsella grandiflora
Cagra.8996s0014 10.0kb upstream 10.0kb upstream 11202 true Scaffold8996: 37433-48634 Capsella grandiflora
Cagra.8996s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold8996: 38635-48634 Capsella grandiflora
Cagra.8996s0014 10.0kb downstream 10.0kb downstream 11202 true Scaffold8996: 27433-38634 Capsella grandiflora
Cagra.8996s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold8996: 27433-37432 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374628 5261 Brassicaceae View MSA
123838223 5264 Brassicales-Malvales View MSA
124349045 5266 SBM View MSA
124249811 5268 Malvidae View MSA
124074454 5270 Rosid View MSA
123749667 5271 Pentapetalae View MSA
122791619 5272 Eudicot View MSA
122042118 5273 Angiosperm View MSA
121350772 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain