Gene : Cagra.9070s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Genomic Order:  2
Name:  ? Cagra.9070s0002 Secondary Identifier:  ? PAC:28909123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9070s0002 0.5kb upstream 0.5kb upstream 2470 true Scaffold9070: 7481-9950 Capsella grandiflora
Cagra.9070s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9070: 9451-9950 Capsella grandiflora
Cagra.9070s0002 0.5kb downstream 0.5kb downstream 2470 true Scaffold9070: 6981-9450 Capsella grandiflora
Cagra.9070s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9070: 6981-7480 Capsella grandiflora
Cagra.9070s0002 1.0kb upstream 1.0kb upstream 2970 true Scaffold9070: 7481-10450 Capsella grandiflora
Cagra.9070s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9070: 9451-10450 Capsella grandiflora
Cagra.9070s0002 1.0kb downstream 1.0kb downstream 2970 true Scaffold9070: 6481-9450 Capsella grandiflora
Cagra.9070s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9070: 6481-7480 Capsella grandiflora
Cagra.9070s0002 2.0kb upstream 2.0kb upstream 3970 true Scaffold9070: 7481-11450 Capsella grandiflora
Cagra.9070s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9070: 9451-11450 Capsella grandiflora
Cagra.9070s0002 2.0kb downstream 2.0kb downstream 3970 true Scaffold9070: 5481-9450 Capsella grandiflora
Cagra.9070s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9070: 5481-7480 Capsella grandiflora
Cagra.9070s0002 5.0kb upstream 5.0kb upstream 6970 true Scaffold9070: 7481-14450 Capsella grandiflora
Cagra.9070s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold9070: 9451-14450 Capsella grandiflora
Cagra.9070s0002 5.0kb downstream 5.0kb downstream 6970 true Scaffold9070: 2481-9450 Capsella grandiflora
Cagra.9070s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold9070: 2481-7480 Capsella grandiflora
Cagra.9070s0002 10.0kb upstream 10.0kb upstream 11970 true Scaffold9070: 7481-19450 Capsella grandiflora
Cagra.9070s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold9070: 9451-19450 Capsella grandiflora
Cagra.9070s0002 10.0kb downstream 10.0kb downstream 9450 true Scaffold9070: 1-9450 Capsella grandiflora
Cagra.9070s0002 10.0kb downstream 10.0kb downstream 7480 false Scaffold9070: 1-7480 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376846 5261 Brassicaceae View MSA
123801372 5264 Brassicales-Malvales View MSA
124298684 5266 SBM View MSA
124150271 5268 Malvidae View MSA
123875918 5270 Rosid View MSA
123459668 5271 Pentapetalae View MSA
122495057 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain