Gene : Cagra.9128s0003 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Genomic Order:  3
Name:  ? Cagra.9128s0003 Secondary Identifier:  ? PAC:28909598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9128s0003 0.5kb upstream 0.5kb upstream 4307 true Scaffold9128: 4885-9191 Capsella grandiflora
Cagra.9128s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9128: 8692-9191 Capsella grandiflora
Cagra.9128s0003 0.5kb downstream 0.5kb downstream 4307 true Scaffold9128: 4385-8691 Capsella grandiflora
Cagra.9128s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9128: 4385-4884 Capsella grandiflora
Cagra.9128s0003 1.0kb upstream 1.0kb upstream 4807 true Scaffold9128: 4885-9691 Capsella grandiflora
Cagra.9128s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9128: 8692-9691 Capsella grandiflora
Cagra.9128s0003 1.0kb downstream 1.0kb downstream 4807 true Scaffold9128: 3885-8691 Capsella grandiflora
Cagra.9128s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9128: 3885-4884 Capsella grandiflora
Cagra.9128s0003 2.0kb upstream 2.0kb upstream 5807 true Scaffold9128: 4885-10691 Capsella grandiflora
Cagra.9128s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9128: 8692-10691 Capsella grandiflora
Cagra.9128s0003 2.0kb downstream 2.0kb downstream 5807 true Scaffold9128: 2885-8691 Capsella grandiflora
Cagra.9128s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9128: 2885-4884 Capsella grandiflora
Cagra.9128s0003 5.0kb upstream 5.0kb upstream 8807 true Scaffold9128: 4885-13691 Capsella grandiflora
Cagra.9128s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold9128: 8692-13691 Capsella grandiflora
Cagra.9128s0003 5.0kb downstream 5.0kb downstream 8691 true Scaffold9128: 1-8691 Capsella grandiflora
Cagra.9128s0003 5.0kb downstream 5.0kb downstream 4884 false Scaffold9128: 1-4884 Capsella grandiflora
Cagra.9128s0003 10.0kb upstream 10.0kb upstream 13807 true Scaffold9128: 4885-18691 Capsella grandiflora
Cagra.9128s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold9128: 8692-18691 Capsella grandiflora
Cagra.9128s0003 10.0kb downstream 10.0kb downstream 8691 true Scaffold9128: 1-8691 Capsella grandiflora
Cagra.9128s0003 10.0kb downstream 10.0kb downstream 4884 false Scaffold9128: 1-4884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041225 5273 Angiosperm View MSA
122376539 5261 Brassicaceae View MSA
123827809 5264 Brassicales-Malvales View MSA
124340156 5266 SBM View MSA
124236905 5268 Malvidae View MSA
124063795 5270 Rosid View MSA
123737485 5271 Pentapetalae View MSA
122787595 5272 Eudicot View MSA
121344399 5274 Embryophyte View MSA
123425601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain