Gene : Cagra.8586s0006 C. grandiflora v1.1
Defline:  (1 of 1) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  6
Name:  ? Cagra.8586s0006 Secondary Identifier:  ? PAC:28913868
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PHOTOALL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-101 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8586s0006 0.5kb upstream 0.5kb upstream 2007 true Scaffold8586: 20997-23003 Capsella grandiflora
Cagra.8586s0006 0.5kb upstream 0.5kb upstream 273 false Scaffold8586: 22731-23003 Capsella grandiflora
Cagra.8586s0006 0.5kb downstream 0.5kb downstream 2234 true Scaffold8586: 20497-22730 Capsella grandiflora
Cagra.8586s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold8586: 20497-20996 Capsella grandiflora
Cagra.8586s0006 1.0kb upstream 1.0kb upstream 2007 true Scaffold8586: 20997-23003 Capsella grandiflora
Cagra.8586s0006 1.0kb upstream 1.0kb upstream 273 false Scaffold8586: 22731-23003 Capsella grandiflora
Cagra.8586s0006 1.0kb downstream 1.0kb downstream 2734 true Scaffold8586: 19997-22730 Capsella grandiflora
Cagra.8586s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold8586: 19997-20996 Capsella grandiflora
Cagra.8586s0006 2.0kb upstream 2.0kb upstream 2007 true Scaffold8586: 20997-23003 Capsella grandiflora
Cagra.8586s0006 2.0kb upstream 2.0kb upstream 273 false Scaffold8586: 22731-23003 Capsella grandiflora
Cagra.8586s0006 2.0kb downstream 2.0kb downstream 3734 true Scaffold8586: 18997-22730 Capsella grandiflora
Cagra.8586s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold8586: 18997-20996 Capsella grandiflora
Cagra.8586s0006 5.0kb upstream 5.0kb upstream 2007 true Scaffold8586: 20997-23003 Capsella grandiflora
Cagra.8586s0006 5.0kb upstream 5.0kb upstream 273 false Scaffold8586: 22731-23003 Capsella grandiflora
Cagra.8586s0006 5.0kb downstream 5.0kb downstream 6734 true Scaffold8586: 15997-22730 Capsella grandiflora
Cagra.8586s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold8586: 15997-20996 Capsella grandiflora
Cagra.8586s0006 10.0kb upstream 10.0kb upstream 2007 true Scaffold8586: 20997-23003 Capsella grandiflora
Cagra.8586s0006 10.0kb upstream 10.0kb upstream 273 false Scaffold8586: 22731-23003 Capsella grandiflora
Cagra.8586s0006 10.0kb downstream 10.0kb downstream 11734 true Scaffold8586: 10997-22730 Capsella grandiflora
Cagra.8586s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold8586: 10997-20996 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377793 5261 Brassicaceae View MSA
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain