Gene : Cagra.8204s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31388:SF4 - PEROXIDASE 9 Genomic Order:  1
Name:  ? Cagra.8204s0001 Secondary Identifier:  ? PAC:28913759
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8204s0001 0.5kb upstream 0.5kb upstream 960 true Scaffold8204: 430-1389 Capsella grandiflora
Cagra.8204s0001 0.5kb upstream 0.5kb upstream 16 false Scaffold8204: 1374-1389 Capsella grandiflora
Cagra.8204s0001 0.5kb downstream 0.5kb downstream 1373 true Scaffold8204: 1-1373 Capsella grandiflora
Cagra.8204s0001 0.5kb downstream 0.5kb downstream 429 false Scaffold8204: 1-429 Capsella grandiflora
Cagra.8204s0001 1.0kb upstream 1.0kb upstream 960 true Scaffold8204: 430-1389 Capsella grandiflora
Cagra.8204s0001 1.0kb upstream 1.0kb upstream 16 false Scaffold8204: 1374-1389 Capsella grandiflora
Cagra.8204s0001 1.0kb downstream 1.0kb downstream 1373 true Scaffold8204: 1-1373 Capsella grandiflora
Cagra.8204s0001 1.0kb downstream 1.0kb downstream 429 false Scaffold8204: 1-429 Capsella grandiflora
Cagra.8204s0001 2.0kb upstream 2.0kb upstream 960 true Scaffold8204: 430-1389 Capsella grandiflora
Cagra.8204s0001 2.0kb upstream 2.0kb upstream 16 false Scaffold8204: 1374-1389 Capsella grandiflora
Cagra.8204s0001 2.0kb downstream 2.0kb downstream 1373 true Scaffold8204: 1-1373 Capsella grandiflora
Cagra.8204s0001 2.0kb downstream 2.0kb downstream 429 false Scaffold8204: 1-429 Capsella grandiflora
Cagra.8204s0001 5.0kb upstream 5.0kb upstream 960 true Scaffold8204: 430-1389 Capsella grandiflora
Cagra.8204s0001 5.0kb upstream 5.0kb upstream 16 false Scaffold8204: 1374-1389 Capsella grandiflora
Cagra.8204s0001 5.0kb downstream 5.0kb downstream 1373 true Scaffold8204: 1-1373 Capsella grandiflora
Cagra.8204s0001 5.0kb downstream 5.0kb downstream 429 false Scaffold8204: 1-429 Capsella grandiflora
Cagra.8204s0001 10.0kb upstream 10.0kb upstream 960 true Scaffold8204: 430-1389 Capsella grandiflora
Cagra.8204s0001 10.0kb upstream 10.0kb upstream 16 false Scaffold8204: 1374-1389 Capsella grandiflora
Cagra.8204s0001 10.0kb downstream 10.0kb downstream 1373 true Scaffold8204: 1-1373 Capsella grandiflora
Cagra.8204s0001 10.0kb downstream 10.0kb downstream 429 false Scaffold8204: 1-429 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026305 5273 Angiosperm View MSA
122334361 5261 Brassicaceae Singleton cluster - no MSA
123837928 5264 Brassicales-Malvales View MSA
124322376 5266 SBM View MSA
124239675 5268 Malvidae View MSA
124063809 5270 Rosid View MSA
123741471 5271 Pentapetalae View MSA
122790024 5272 Eudicot View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain