Gene : Cagra.8250s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  1
Name:  ? Cagra.8250s0001 Secondary Identifier:  ? PAC:28896847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8250s0001 0.5kb upstream 0.5kb upstream 3547 true Scaffold8250: 1026-4572 Capsella grandiflora
Cagra.8250s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold8250: 4073-4572 Capsella grandiflora
Cagra.8250s0001 0.5kb downstream 0.5kb downstream 3547 true Scaffold8250: 526-4072 Capsella grandiflora
Cagra.8250s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold8250: 526-1025 Capsella grandiflora
Cagra.8250s0001 1.0kb upstream 1.0kb upstream 4047 true Scaffold8250: 1026-5072 Capsella grandiflora
Cagra.8250s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold8250: 4073-5072 Capsella grandiflora
Cagra.8250s0001 1.0kb downstream 1.0kb downstream 4047 true Scaffold8250: 26-4072 Capsella grandiflora
Cagra.8250s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold8250: 26-1025 Capsella grandiflora
Cagra.8250s0001 2.0kb upstream 2.0kb upstream 5047 true Scaffold8250: 1026-6072 Capsella grandiflora
Cagra.8250s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold8250: 4073-6072 Capsella grandiflora
Cagra.8250s0001 2.0kb downstream 2.0kb downstream 4072 true Scaffold8250: 1-4072 Capsella grandiflora
Cagra.8250s0001 2.0kb downstream 2.0kb downstream 1025 false Scaffold8250: 1-1025 Capsella grandiflora
Cagra.8250s0001 5.0kb upstream 5.0kb upstream 8047 true Scaffold8250: 1026-9072 Capsella grandiflora
Cagra.8250s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold8250: 4073-9072 Capsella grandiflora
Cagra.8250s0001 5.0kb downstream 5.0kb downstream 4072 true Scaffold8250: 1-4072 Capsella grandiflora
Cagra.8250s0001 5.0kb downstream 5.0kb downstream 1025 false Scaffold8250: 1-1025 Capsella grandiflora
Cagra.8250s0001 10.0kb upstream 10.0kb upstream 8398 true Scaffold8250: 1026-9423 Capsella grandiflora
Cagra.8250s0001 10.0kb upstream 10.0kb upstream 5351 false Scaffold8250: 4073-9423 Capsella grandiflora
Cagra.8250s0001 10.0kb downstream 10.0kb downstream 4072 true Scaffold8250: 1-4072 Capsella grandiflora
Cagra.8250s0001 10.0kb downstream 10.0kb downstream 1025 false Scaffold8250: 1-1025 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361385 5261 Brassicaceae View MSA
123835973 5264 Brassicales-Malvales View MSA
124344257 5266 SBM View MSA
124239665 5268 Malvidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain