Gene : Cagra.8287s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  11
Name:  ? Cagra.8287s0011 Secondary Identifier:  ? PAC:28904269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8287s0011 0.5kb upstream 0.5kb upstream 3582 true Scaffold8287: 52708-56289 Capsella grandiflora
Cagra.8287s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold8287: 52708-53207 Capsella grandiflora
Cagra.8287s0011 0.5kb downstream 0.5kb downstream 3582 true Scaffold8287: 53208-56789 Capsella grandiflora
Cagra.8287s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold8287: 56290-56789 Capsella grandiflora
Cagra.8287s0011 1.0kb upstream 1.0kb upstream 4082 true Scaffold8287: 52208-56289 Capsella grandiflora
Cagra.8287s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold8287: 52208-53207 Capsella grandiflora
Cagra.8287s0011 1.0kb downstream 1.0kb downstream 4082 true Scaffold8287: 53208-57289 Capsella grandiflora
Cagra.8287s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold8287: 56290-57289 Capsella grandiflora
Cagra.8287s0011 2.0kb upstream 2.0kb upstream 5082 true Scaffold8287: 51208-56289 Capsella grandiflora
Cagra.8287s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold8287: 51208-53207 Capsella grandiflora
Cagra.8287s0011 2.0kb downstream 2.0kb downstream 4596 true Scaffold8287: 53208-57803 Capsella grandiflora
Cagra.8287s0011 2.0kb downstream 2.0kb downstream 1514 false Scaffold8287: 56290-57803 Capsella grandiflora
Cagra.8287s0011 5.0kb upstream 5.0kb upstream 8082 true Scaffold8287: 48208-56289 Capsella grandiflora
Cagra.8287s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold8287: 48208-53207 Capsella grandiflora
Cagra.8287s0011 5.0kb downstream 5.0kb downstream 4596 true Scaffold8287: 53208-57803 Capsella grandiflora
Cagra.8287s0011 5.0kb downstream 5.0kb downstream 1514 false Scaffold8287: 56290-57803 Capsella grandiflora
Cagra.8287s0011 10.0kb upstream 10.0kb upstream 13082 true Scaffold8287: 43208-56289 Capsella grandiflora
Cagra.8287s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold8287: 43208-53207 Capsella grandiflora
Cagra.8287s0011 10.0kb downstream 10.0kb downstream 4596 true Scaffold8287: 53208-57803 Capsella grandiflora
Cagra.8287s0011 10.0kb downstream 10.0kb downstream 1514 false Scaffold8287: 56290-57803 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360561 5261 Brassicaceae View MSA
123836210 5264 Brassicales-Malvales View MSA
124337642 5266 SBM View MSA
124245745 5268 Malvidae View MSA
124061899 5270 Rosid View MSA
123745860 5271 Pentapetalae View MSA
122790423 5272 Eudicot View MSA
122044910 5273 Angiosperm View MSA
121350104 5274 Embryophyte View MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain