Gene : Cagra.7999s0006 C. grandiflora v1.1
Defline:  (1 of 18) PTHR11165 - SKP1 Genomic Order:  6
Name:  ? Cagra.7999s0006 Secondary Identifier:  ? PAC:28898051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7999s0006 0.5kb upstream 0.5kb upstream 2105 true Scaffold7999: 20889-22993 Capsella grandiflora
Cagra.7999s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold7999: 22494-22993 Capsella grandiflora
Cagra.7999s0006 0.5kb downstream 0.5kb downstream 2105 true Scaffold7999: 20389-22493 Capsella grandiflora
Cagra.7999s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold7999: 20389-20888 Capsella grandiflora
Cagra.7999s0006 1.0kb upstream 1.0kb upstream 2605 true Scaffold7999: 20889-23493 Capsella grandiflora
Cagra.7999s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold7999: 22494-23493 Capsella grandiflora
Cagra.7999s0006 1.0kb downstream 1.0kb downstream 2605 true Scaffold7999: 19889-22493 Capsella grandiflora
Cagra.7999s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold7999: 19889-20888 Capsella grandiflora
Cagra.7999s0006 2.0kb upstream 2.0kb upstream 3605 true Scaffold7999: 20889-24493 Capsella grandiflora
Cagra.7999s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold7999: 22494-24493 Capsella grandiflora
Cagra.7999s0006 2.0kb downstream 2.0kb downstream 3605 true Scaffold7999: 18889-22493 Capsella grandiflora
Cagra.7999s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold7999: 18889-20888 Capsella grandiflora
Cagra.7999s0006 5.0kb upstream 5.0kb upstream 6605 true Scaffold7999: 20889-27493 Capsella grandiflora
Cagra.7999s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold7999: 22494-27493 Capsella grandiflora
Cagra.7999s0006 5.0kb downstream 5.0kb downstream 6605 true Scaffold7999: 15889-22493 Capsella grandiflora
Cagra.7999s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold7999: 15889-20888 Capsella grandiflora
Cagra.7999s0006 10.0kb upstream 10.0kb upstream 11605 true Scaffold7999: 20889-32493 Capsella grandiflora
Cagra.7999s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold7999: 22494-32493 Capsella grandiflora
Cagra.7999s0006 10.0kb downstream 10.0kb downstream 11605 true Scaffold7999: 10889-22493 Capsella grandiflora
Cagra.7999s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold7999: 10889-20888 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343322 5261 Brassicaceae View MSA
123837692 5264 Brassicales-Malvales View MSA
124349678 5266 SBM View MSA
124250009 5268 Malvidae View MSA
124067462 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain