Gene : Cagra.8005s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  12
Name:  ? Cagra.8005s0012 Secondary Identifier:  ? PAC:28901885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8005s0012 0.5kb upstream 0.5kb upstream 1380 true Scaffold8005: 44851-46230 Capsella grandiflora
Cagra.8005s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold8005: 45731-46230 Capsella grandiflora
Cagra.8005s0012 0.5kb downstream 0.5kb downstream 1380 true Scaffold8005: 44351-45730 Capsella grandiflora
Cagra.8005s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold8005: 44351-44850 Capsella grandiflora
Cagra.8005s0012 1.0kb upstream 1.0kb upstream 1880 true Scaffold8005: 44851-46730 Capsella grandiflora
Cagra.8005s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold8005: 45731-46730 Capsella grandiflora
Cagra.8005s0012 1.0kb downstream 1.0kb downstream 1880 true Scaffold8005: 43851-45730 Capsella grandiflora
Cagra.8005s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold8005: 43851-44850 Capsella grandiflora
Cagra.8005s0012 2.0kb upstream 2.0kb upstream 2880 true Scaffold8005: 44851-47730 Capsella grandiflora
Cagra.8005s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold8005: 45731-47730 Capsella grandiflora
Cagra.8005s0012 2.0kb downstream 2.0kb downstream 2880 true Scaffold8005: 42851-45730 Capsella grandiflora
Cagra.8005s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold8005: 42851-44850 Capsella grandiflora
Cagra.8005s0012 5.0kb upstream 5.0kb upstream 5880 true Scaffold8005: 44851-50730 Capsella grandiflora
Cagra.8005s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold8005: 45731-50730 Capsella grandiflora
Cagra.8005s0012 5.0kb downstream 5.0kb downstream 5880 true Scaffold8005: 39851-45730 Capsella grandiflora
Cagra.8005s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold8005: 39851-44850 Capsella grandiflora
Cagra.8005s0012 10.0kb upstream 10.0kb upstream 10880 true Scaffold8005: 44851-55730 Capsella grandiflora
Cagra.8005s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold8005: 45731-55730 Capsella grandiflora
Cagra.8005s0012 10.0kb downstream 10.0kb downstream 10880 true Scaffold8005: 34851-45730 Capsella grandiflora
Cagra.8005s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold8005: 34851-44850 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373808 5261 Brassicaceae View MSA
123829497 5264 Brassicales-Malvales View MSA
124345783 5266 SBM View MSA
124245012 5268 Malvidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain