Gene : Cagra.8005s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10438:SF283 - THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC Genomic Order:  5
Name:  ? Cagra.8005s0005 Secondary Identifier:  ? PAC:28901891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8005s0005 0.5kb upstream 0.5kb upstream 1786 true Scaffold8005: 17050-18835 Capsella grandiflora
Cagra.8005s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold8005: 18336-18835 Capsella grandiflora
Cagra.8005s0005 0.5kb downstream 0.5kb downstream 1786 true Scaffold8005: 16550-18335 Capsella grandiflora
Cagra.8005s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold8005: 16550-17049 Capsella grandiflora
Cagra.8005s0005 1.0kb upstream 1.0kb upstream 2286 true Scaffold8005: 17050-19335 Capsella grandiflora
Cagra.8005s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold8005: 18336-19335 Capsella grandiflora
Cagra.8005s0005 1.0kb downstream 1.0kb downstream 2286 true Scaffold8005: 16050-18335 Capsella grandiflora
Cagra.8005s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold8005: 16050-17049 Capsella grandiflora
Cagra.8005s0005 2.0kb upstream 2.0kb upstream 3286 true Scaffold8005: 17050-20335 Capsella grandiflora
Cagra.8005s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold8005: 18336-20335 Capsella grandiflora
Cagra.8005s0005 2.0kb downstream 2.0kb downstream 3286 true Scaffold8005: 15050-18335 Capsella grandiflora
Cagra.8005s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold8005: 15050-17049 Capsella grandiflora
Cagra.8005s0005 5.0kb upstream 5.0kb upstream 6286 true Scaffold8005: 17050-23335 Capsella grandiflora
Cagra.8005s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold8005: 18336-23335 Capsella grandiflora
Cagra.8005s0005 5.0kb downstream 5.0kb downstream 6286 true Scaffold8005: 12050-18335 Capsella grandiflora
Cagra.8005s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold8005: 12050-17049 Capsella grandiflora
Cagra.8005s0005 10.0kb upstream 10.0kb upstream 11286 true Scaffold8005: 17050-28335 Capsella grandiflora
Cagra.8005s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold8005: 18336-28335 Capsella grandiflora
Cagra.8005s0005 10.0kb downstream 10.0kb downstream 11286 true Scaffold8005: 7050-18335 Capsella grandiflora
Cagra.8005s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold8005: 7050-17049 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360196 5261 Brassicaceae View MSA
123833505 5264 Brassicales-Malvales View MSA
124338712 5266 SBM View MSA
124247855 5268 Malvidae View MSA
124066341 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain