Gene : Cagra.8123s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19139:SF181 - AQUAPORIN NIP4-1-RELATED Genomic Order:  2
Name:  ? Cagra.8123s0002 Secondary Identifier:  ? PAC:28894297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.8123s0002 0.5kb upstream 0.5kb upstream 3277 true Scaffold8123: 6383-9659 Capsella grandiflora
Cagra.8123s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold8123: 6383-6882 Capsella grandiflora
Cagra.8123s0002 0.5kb downstream 0.5kb downstream 3277 true Scaffold8123: 6883-10159 Capsella grandiflora
Cagra.8123s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold8123: 9660-10159 Capsella grandiflora
Cagra.8123s0002 1.0kb upstream 1.0kb upstream 3777 true Scaffold8123: 5883-9659 Capsella grandiflora
Cagra.8123s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold8123: 5883-6882 Capsella grandiflora
Cagra.8123s0002 1.0kb downstream 1.0kb downstream 3777 true Scaffold8123: 6883-10659 Capsella grandiflora
Cagra.8123s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold8123: 9660-10659 Capsella grandiflora
Cagra.8123s0002 2.0kb upstream 2.0kb upstream 4777 true Scaffold8123: 4883-9659 Capsella grandiflora
Cagra.8123s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold8123: 4883-6882 Capsella grandiflora
Cagra.8123s0002 2.0kb downstream 2.0kb downstream 4777 true Scaffold8123: 6883-11659 Capsella grandiflora
Cagra.8123s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold8123: 9660-11659 Capsella grandiflora
Cagra.8123s0002 5.0kb upstream 5.0kb upstream 7777 true Scaffold8123: 1883-9659 Capsella grandiflora
Cagra.8123s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold8123: 1883-6882 Capsella grandiflora
Cagra.8123s0002 5.0kb downstream 5.0kb downstream 7777 true Scaffold8123: 6883-14659 Capsella grandiflora
Cagra.8123s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold8123: 9660-14659 Capsella grandiflora
Cagra.8123s0002 10.0kb upstream 10.0kb upstream 9659 true Scaffold8123: 1-9659 Capsella grandiflora
Cagra.8123s0002 10.0kb upstream 10.0kb upstream 6882 false Scaffold8123: 1-6882 Capsella grandiflora
Cagra.8123s0002 10.0kb downstream 10.0kb downstream 11669 true Scaffold8123: 6883-18551 Capsella grandiflora
Cagra.8123s0002 10.0kb downstream 10.0kb downstream 8892 false Scaffold8123: 9660-18551 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380459 5261 Brassicaceae View MSA
123829257 5264 Brassicales-Malvales View MSA
124344874 5266 SBM View MSA
124244379 5268 Malvidae View MSA
124063963 5270 Rosid View MSA
123753474 5271 Pentapetalae View MSA
122796855 5272 Eudicot View MSA
122046920 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain