Gene : Cagra.7786s0003 C. grandiflora v1.1
Defline:  (1 of 1) KOG4727 - U1-like Zn-finger protein Genomic Order:  3
Name:  ? Cagra.7786s0003 Secondary Identifier:  ? PAC:28903752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7786s0003 0.5kb upstream 0.5kb upstream 2620 true Scaffold7786: 9656-12275 Capsella grandiflora
Cagra.7786s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold7786: 9656-10155 Capsella grandiflora
Cagra.7786s0003 0.5kb downstream 0.5kb downstream 2620 true Scaffold7786: 10156-12775 Capsella grandiflora
Cagra.7786s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold7786: 12276-12775 Capsella grandiflora
Cagra.7786s0003 1.0kb upstream 1.0kb upstream 3120 true Scaffold7786: 9156-12275 Capsella grandiflora
Cagra.7786s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold7786: 9156-10155 Capsella grandiflora
Cagra.7786s0003 1.0kb downstream 1.0kb downstream 3120 true Scaffold7786: 10156-13275 Capsella grandiflora
Cagra.7786s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold7786: 12276-13275 Capsella grandiflora
Cagra.7786s0003 2.0kb upstream 2.0kb upstream 4120 true Scaffold7786: 8156-12275 Capsella grandiflora
Cagra.7786s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold7786: 8156-10155 Capsella grandiflora
Cagra.7786s0003 2.0kb downstream 2.0kb downstream 4120 true Scaffold7786: 10156-14275 Capsella grandiflora
Cagra.7786s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold7786: 12276-14275 Capsella grandiflora
Cagra.7786s0003 5.0kb upstream 5.0kb upstream 7120 true Scaffold7786: 5156-12275 Capsella grandiflora
Cagra.7786s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold7786: 5156-10155 Capsella grandiflora
Cagra.7786s0003 5.0kb downstream 5.0kb downstream 7120 true Scaffold7786: 10156-17275 Capsella grandiflora
Cagra.7786s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold7786: 12276-17275 Capsella grandiflora
Cagra.7786s0003 10.0kb upstream 10.0kb upstream 12120 true Scaffold7786: 156-12275 Capsella grandiflora
Cagra.7786s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold7786: 156-10155 Capsella grandiflora
Cagra.7786s0003 10.0kb downstream 10.0kb downstream 12120 true Scaffold7786: 10156-22275 Capsella grandiflora
Cagra.7786s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold7786: 12276-22275 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370016 5261 Brassicaceae View MSA
123830110 5264 Brassicales-Malvales View MSA
124339986 5266 SBM View MSA
124241654 5268 Malvidae View MSA
124068799 5270 Rosid View MSA
123739727 5271 Pentapetalae View MSA
122792158 5272 Eudicot View MSA
122047848 5273 Angiosperm View MSA
121346040 5274 Embryophyte View MSA
123426715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain