Gene : Cagra.7982s0001 C. grandiflora v1.1
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.7982s0001 Secondary Identifier:  ? PAC:28898086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7982s0001 0.5kb upstream 0.5kb upstream 750 true Scaffold7982: 295-1044 Capsella grandiflora
Cagra.7982s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold7982: 1043-1044 Capsella grandiflora
Cagra.7982s0001 0.5kb downstream 0.5kb downstream 1042 true Scaffold7982: 1-1042 Capsella grandiflora
Cagra.7982s0001 0.5kb downstream 0.5kb downstream 294 false Scaffold7982: 1-294 Capsella grandiflora
Cagra.7982s0001 1.0kb upstream 1.0kb upstream 750 true Scaffold7982: 295-1044 Capsella grandiflora
Cagra.7982s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold7982: 1043-1044 Capsella grandiflora
Cagra.7982s0001 1.0kb downstream 1.0kb downstream 1042 true Scaffold7982: 1-1042 Capsella grandiflora
Cagra.7982s0001 1.0kb downstream 1.0kb downstream 294 false Scaffold7982: 1-294 Capsella grandiflora
Cagra.7982s0001 2.0kb upstream 2.0kb upstream 750 true Scaffold7982: 295-1044 Capsella grandiflora
Cagra.7982s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold7982: 1043-1044 Capsella grandiflora
Cagra.7982s0001 2.0kb downstream 2.0kb downstream 1042 true Scaffold7982: 1-1042 Capsella grandiflora
Cagra.7982s0001 2.0kb downstream 2.0kb downstream 294 false Scaffold7982: 1-294 Capsella grandiflora
Cagra.7982s0001 5.0kb upstream 5.0kb upstream 750 true Scaffold7982: 295-1044 Capsella grandiflora
Cagra.7982s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold7982: 1043-1044 Capsella grandiflora
Cagra.7982s0001 5.0kb downstream 5.0kb downstream 1042 true Scaffold7982: 1-1042 Capsella grandiflora
Cagra.7982s0001 5.0kb downstream 5.0kb downstream 294 false Scaffold7982: 1-294 Capsella grandiflora
Cagra.7982s0001 10.0kb upstream 10.0kb upstream 750 true Scaffold7982: 295-1044 Capsella grandiflora
Cagra.7982s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold7982: 1043-1044 Capsella grandiflora
Cagra.7982s0001 10.0kb downstream 10.0kb downstream 1042 true Scaffold7982: 1-1042 Capsella grandiflora
Cagra.7982s0001 10.0kb downstream 10.0kb downstream 294 false Scaffold7982: 1-294 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338190 5261 Brassicaceae View MSA
123837721 5264 Brassicales-Malvales View MSA
124350436 5266 SBM View MSA
124254617 5268 Malvidae View MSA
124074534 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain