Gene : Cagra.7662s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10015:SF186 - HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED Genomic Order:  1
Name:  ? Cagra.7662s0001 Secondary Identifier:  ? PAC:28907333
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.7662s0001 0.5kb upstream 0.5kb upstream 2076 true Scaffold7662: 6591-8666 Capsella grandiflora
Cagra.7662s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold7662: 8167-8666 Capsella grandiflora
Cagra.7662s0001 0.5kb downstream 0.5kb downstream 2076 true Scaffold7662: 6091-8166 Capsella grandiflora
Cagra.7662s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold7662: 6091-6590 Capsella grandiflora
Cagra.7662s0001 1.0kb upstream 1.0kb upstream 2576 true Scaffold7662: 6591-9166 Capsella grandiflora
Cagra.7662s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold7662: 8167-9166 Capsella grandiflora
Cagra.7662s0001 1.0kb downstream 1.0kb downstream 2576 true Scaffold7662: 5591-8166 Capsella grandiflora
Cagra.7662s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold7662: 5591-6590 Capsella grandiflora
Cagra.7662s0001 2.0kb upstream 2.0kb upstream 3576 true Scaffold7662: 6591-10166 Capsella grandiflora
Cagra.7662s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold7662: 8167-10166 Capsella grandiflora
Cagra.7662s0001 2.0kb downstream 2.0kb downstream 3576 true Scaffold7662: 4591-8166 Capsella grandiflora
Cagra.7662s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold7662: 4591-6590 Capsella grandiflora
Cagra.7662s0001 5.0kb upstream 5.0kb upstream 3828 true Scaffold7662: 6591-10418 Capsella grandiflora
Cagra.7662s0001 5.0kb upstream 5.0kb upstream 2252 false Scaffold7662: 8167-10418 Capsella grandiflora
Cagra.7662s0001 5.0kb downstream 5.0kb downstream 6576 true Scaffold7662: 1591-8166 Capsella grandiflora
Cagra.7662s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold7662: 1591-6590 Capsella grandiflora
Cagra.7662s0001 10.0kb upstream 10.0kb upstream 3828 true Scaffold7662: 6591-10418 Capsella grandiflora
Cagra.7662s0001 10.0kb upstream 10.0kb upstream 2252 false Scaffold7662: 8167-10418 Capsella grandiflora
Cagra.7662s0001 10.0kb downstream 10.0kb downstream 8166 true Scaffold7662: 1-8166 Capsella grandiflora
Cagra.7662s0001 10.0kb downstream 10.0kb downstream 6590 false Scaffold7662: 1-6590 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364565 5261 Brassicaceae View MSA
123833129 5264 Brassicales-Malvales View MSA
124342162 5266 SBM View MSA
124240003 5268 Malvidae View MSA
124060491 5270 Rosid View MSA
123737579 5271 Pentapetalae View MSA
122795301 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain