Gene : Cagra.12450s0003 C. grandiflora v1.1
Genomic Order:  3 Name:  ? Cagra.12450s0003
Secondary Identifier:  ? PAC:28896305
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12450s0003 0.5kb upstream 0.5kb upstream 2324 true Scaffold12450: 12667-14990 Capsella grandiflora
Cagra.12450s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12450: 12667-13166 Capsella grandiflora
Cagra.12450s0003 0.5kb downstream 0.5kb downstream 2324 true Scaffold12450: 13167-15490 Capsella grandiflora
Cagra.12450s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12450: 14991-15490 Capsella grandiflora
Cagra.12450s0003 1.0kb upstream 1.0kb upstream 2824 true Scaffold12450: 12167-14990 Capsella grandiflora
Cagra.12450s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12450: 12167-13166 Capsella grandiflora
Cagra.12450s0003 1.0kb downstream 1.0kb downstream 2824 true Scaffold12450: 13167-15990 Capsella grandiflora
Cagra.12450s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12450: 14991-15990 Capsella grandiflora
Cagra.12450s0003 2.0kb upstream 2.0kb upstream 3824 true Scaffold12450: 11167-14990 Capsella grandiflora
Cagra.12450s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12450: 11167-13166 Capsella grandiflora
Cagra.12450s0003 2.0kb downstream 2.0kb downstream 3824 true Scaffold12450: 13167-16990 Capsella grandiflora
Cagra.12450s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12450: 14991-16990 Capsella grandiflora
Cagra.12450s0003 5.0kb upstream 5.0kb upstream 6824 true Scaffold12450: 8167-14990 Capsella grandiflora
Cagra.12450s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold12450: 8167-13166 Capsella grandiflora
Cagra.12450s0003 5.0kb downstream 5.0kb downstream 6824 true Scaffold12450: 13167-19990 Capsella grandiflora
Cagra.12450s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12450: 14991-19990 Capsella grandiflora
Cagra.12450s0003 10.0kb upstream 10.0kb upstream 11824 true Scaffold12450: 3167-14990 Capsella grandiflora
Cagra.12450s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold12450: 3167-13166 Capsella grandiflora
Cagra.12450s0003 10.0kb downstream 10.0kb downstream 9599 true Scaffold12450: 13167-22765 Capsella grandiflora
Cagra.12450s0003 10.0kb downstream 10.0kb downstream 7775 false Scaffold12450: 14991-22765 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363621 5261 Brassicaceae View MSA
123798582 5264 Brassicales-Malvales View MSA
124296198 5266 SBM View MSA
124148419 5268 Malvidae View MSA
124072121 5270 Rosid View MSA
123753133 5271 Pentapetalae View MSA
122794292 5272 Eudicot View MSA
122045555 5273 Angiosperm View MSA
121349890 5274 Embryophyte View MSA
123381485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain