Gene : Cagra.12562s0001 C. grandiflora v1.1
Defline:  (1 of 5) PF06136 - Domain of unknown function (DUF966) (DUF966) Genomic Order:  1
Name:  ? Cagra.12562s0001 Secondary Identifier:  ? PAC:28895551
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12562s0001 0.5kb upstream 0.5kb upstream 3156 true Scaffold12562: 1-3156 Capsella grandiflora
Cagra.12562s0001 0.5kb upstream 0.5kb upstream 390 false Scaffold12562: 1-390 Capsella grandiflora
Cagra.12562s0001 0.5kb downstream 0.5kb downstream 3266 true Scaffold12562: 391-3656 Capsella grandiflora
Cagra.12562s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12562: 3157-3656 Capsella grandiflora
Cagra.12562s0001 1.0kb upstream 1.0kb upstream 3156 true Scaffold12562: 1-3156 Capsella grandiflora
Cagra.12562s0001 1.0kb upstream 1.0kb upstream 390 false Scaffold12562: 1-390 Capsella grandiflora
Cagra.12562s0001 1.0kb downstream 1.0kb downstream 3766 true Scaffold12562: 391-4156 Capsella grandiflora
Cagra.12562s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12562: 3157-4156 Capsella grandiflora
Cagra.12562s0001 2.0kb upstream 2.0kb upstream 3156 true Scaffold12562: 1-3156 Capsella grandiflora
Cagra.12562s0001 2.0kb upstream 2.0kb upstream 390 false Scaffold12562: 1-390 Capsella grandiflora
Cagra.12562s0001 2.0kb downstream 2.0kb downstream 4766 true Scaffold12562: 391-5156 Capsella grandiflora
Cagra.12562s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12562: 3157-5156 Capsella grandiflora
Cagra.12562s0001 5.0kb upstream 5.0kb upstream 3156 true Scaffold12562: 1-3156 Capsella grandiflora
Cagra.12562s0001 5.0kb upstream 5.0kb upstream 390 false Scaffold12562: 1-390 Capsella grandiflora
Cagra.12562s0001 5.0kb downstream 5.0kb downstream 7766 true Scaffold12562: 391-8156 Capsella grandiflora
Cagra.12562s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12562: 3157-8156 Capsella grandiflora
Cagra.12562s0001 10.0kb upstream 10.0kb upstream 3156 true Scaffold12562: 1-3156 Capsella grandiflora
Cagra.12562s0001 10.0kb upstream 10.0kb upstream 390 false Scaffold12562: 1-390 Capsella grandiflora
Cagra.12562s0001 10.0kb downstream 10.0kb downstream 12766 true Scaffold12562: 391-13156 Capsella grandiflora
Cagra.12562s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12562: 3157-13156 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362313 5261 Brassicaceae View MSA
123828410 5264 Brassicales-Malvales View MSA
124340929 5266 SBM View MSA
124237593 5268 Malvidae View MSA
124064121 5270 Rosid View MSA
123739995 5271 Pentapetalae View MSA
122790698 5272 Eudicot View MSA
122050993 5273 Angiosperm View MSA
121349769 5274 Embryophyte View MSA
123381438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain