Gene : Cagra.12607s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23336:SF14 - CW-TYPE ZINC-FINGER PROTEIN Genomic Order:  2
Name:  ? Cagra.12607s0002 Secondary Identifier:  ? PAC:28895233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12607s0002 0.5kb upstream 0.5kb upstream 7154 true Scaffold12607: 7786-14939 Capsella grandiflora
Cagra.12607s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12607: 7786-8285 Capsella grandiflora
Cagra.12607s0002 0.5kb downstream 0.5kb downstream 7154 true Scaffold12607: 8286-15439 Capsella grandiflora
Cagra.12607s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12607: 14940-15439 Capsella grandiflora
Cagra.12607s0002 1.0kb upstream 1.0kb upstream 7654 true Scaffold12607: 7286-14939 Capsella grandiflora
Cagra.12607s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12607: 7286-8285 Capsella grandiflora
Cagra.12607s0002 1.0kb downstream 1.0kb downstream 7654 true Scaffold12607: 8286-15939 Capsella grandiflora
Cagra.12607s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12607: 14940-15939 Capsella grandiflora
Cagra.12607s0002 2.0kb upstream 2.0kb upstream 8654 true Scaffold12607: 6286-14939 Capsella grandiflora
Cagra.12607s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12607: 6286-8285 Capsella grandiflora
Cagra.12607s0002 2.0kb downstream 2.0kb downstream 8654 true Scaffold12607: 8286-16939 Capsella grandiflora
Cagra.12607s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12607: 14940-16939 Capsella grandiflora
Cagra.12607s0002 5.0kb upstream 5.0kb upstream 11654 true Scaffold12607: 3286-14939 Capsella grandiflora
Cagra.12607s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12607: 3286-8285 Capsella grandiflora
Cagra.12607s0002 5.0kb downstream 5.0kb downstream 11654 true Scaffold12607: 8286-19939 Capsella grandiflora
Cagra.12607s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12607: 14940-19939 Capsella grandiflora
Cagra.12607s0002 10.0kb upstream 10.0kb upstream 14939 true Scaffold12607: 1-14939 Capsella grandiflora
Cagra.12607s0002 10.0kb upstream 10.0kb upstream 8285 false Scaffold12607: 1-8285 Capsella grandiflora
Cagra.12607s0002 10.0kb downstream 10.0kb downstream 16654 true Scaffold12607: 8286-24939 Capsella grandiflora
Cagra.12607s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold12607: 14940-24939 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338339 5261 Brassicaceae View MSA
123778927 5264 Brassicales-Malvales View MSA
124277261 5266 SBM View MSA
124132479 5268 Malvidae View MSA
124070830 5270 Rosid View MSA
123751363 5271 Pentapetalae View MSA
122792516 5272 Eudicot View MSA
122044427 5273 Angiosperm View MSA
121345237 5274 Embryophyte View MSA
123380178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain