Gene : Cagra.12576s0001 C. grandiflora v1.1
Defline:  (1 of 52) PF00628 - PHD-finger Genomic Order:  1
Name:  ? Cagra.12576s0001 Secondary Identifier:  ? PAC:28894780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12576s0001 0.5kb upstream 0.5kb upstream 3243 true Scaffold12576: 1-3243 Capsella grandiflora
Cagra.12576s0001 0.5kb upstream 0.5kb upstream 271 false Scaffold12576: 1-271 Capsella grandiflora
Cagra.12576s0001 0.5kb downstream 0.5kb downstream 3472 true Scaffold12576: 272-3743 Capsella grandiflora
Cagra.12576s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12576: 3244-3743 Capsella grandiflora
Cagra.12576s0001 1.0kb upstream 1.0kb upstream 3243 true Scaffold12576: 1-3243 Capsella grandiflora
Cagra.12576s0001 1.0kb upstream 1.0kb upstream 271 false Scaffold12576: 1-271 Capsella grandiflora
Cagra.12576s0001 1.0kb downstream 1.0kb downstream 3972 true Scaffold12576: 272-4243 Capsella grandiflora
Cagra.12576s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12576: 3244-4243 Capsella grandiflora
Cagra.12576s0001 2.0kb upstream 2.0kb upstream 3243 true Scaffold12576: 1-3243 Capsella grandiflora
Cagra.12576s0001 2.0kb upstream 2.0kb upstream 271 false Scaffold12576: 1-271 Capsella grandiflora
Cagra.12576s0001 2.0kb downstream 2.0kb downstream 4972 true Scaffold12576: 272-5243 Capsella grandiflora
Cagra.12576s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12576: 3244-5243 Capsella grandiflora
Cagra.12576s0001 5.0kb upstream 5.0kb upstream 3243 true Scaffold12576: 1-3243 Capsella grandiflora
Cagra.12576s0001 5.0kb upstream 5.0kb upstream 271 false Scaffold12576: 1-271 Capsella grandiflora
Cagra.12576s0001 5.0kb downstream 5.0kb downstream 7972 true Scaffold12576: 272-8243 Capsella grandiflora
Cagra.12576s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12576: 3244-8243 Capsella grandiflora
Cagra.12576s0001 10.0kb upstream 10.0kb upstream 3243 true Scaffold12576: 1-3243 Capsella grandiflora
Cagra.12576s0001 10.0kb upstream 10.0kb upstream 271 false Scaffold12576: 1-271 Capsella grandiflora
Cagra.12576s0001 10.0kb downstream 10.0kb downstream 12972 true Scaffold12576: 272-13243 Capsella grandiflora
Cagra.12576s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12576: 3244-13243 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380671 5261 Brassicaceae View MSA
123838696 5264 Brassicales-Malvales View MSA
124338227 5266 SBM View MSA
124251971 5268 Malvidae View MSA
124050819 5270 Rosid View MSA
123744340 5271 Pentapetalae View MSA
122794905 5272 Eudicot View MSA
122051166 5273 Angiosperm View MSA
121312323 5274 Embryophyte View MSA
123349506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain