Gene : Cagra.12686s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31989:SF18 - PROTEIN BEARSKIN1 Genomic Order:  5
Name:  ? Cagra.12686s0005 Secondary Identifier:  ? PAC:28916470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12686s0005 0.5kb upstream 0.5kb upstream 3014 true Scaffold12686: 19800-22813 Capsella grandiflora
Cagra.12686s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold12686: 22314-22813 Capsella grandiflora
Cagra.12686s0005 0.5kb downstream 0.5kb downstream 3014 true Scaffold12686: 19300-22313 Capsella grandiflora
Cagra.12686s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold12686: 19300-19799 Capsella grandiflora
Cagra.12686s0005 1.0kb upstream 1.0kb upstream 3128 true Scaffold12686: 19800-22927 Capsella grandiflora
Cagra.12686s0005 1.0kb upstream 1.0kb upstream 614 false Scaffold12686: 22314-22927 Capsella grandiflora
Cagra.12686s0005 1.0kb downstream 1.0kb downstream 3514 true Scaffold12686: 18800-22313 Capsella grandiflora
Cagra.12686s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold12686: 18800-19799 Capsella grandiflora
Cagra.12686s0005 2.0kb upstream 2.0kb upstream 3128 true Scaffold12686: 19800-22927 Capsella grandiflora
Cagra.12686s0005 2.0kb upstream 2.0kb upstream 614 false Scaffold12686: 22314-22927 Capsella grandiflora
Cagra.12686s0005 2.0kb downstream 2.0kb downstream 4514 true Scaffold12686: 17800-22313 Capsella grandiflora
Cagra.12686s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold12686: 17800-19799 Capsella grandiflora
Cagra.12686s0005 5.0kb upstream 5.0kb upstream 3128 true Scaffold12686: 19800-22927 Capsella grandiflora
Cagra.12686s0005 5.0kb upstream 5.0kb upstream 614 false Scaffold12686: 22314-22927 Capsella grandiflora
Cagra.12686s0005 5.0kb downstream 5.0kb downstream 7514 true Scaffold12686: 14800-22313 Capsella grandiflora
Cagra.12686s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold12686: 14800-19799 Capsella grandiflora
Cagra.12686s0005 10.0kb upstream 10.0kb upstream 3128 true Scaffold12686: 19800-22927 Capsella grandiflora
Cagra.12686s0005 10.0kb upstream 10.0kb upstream 614 false Scaffold12686: 22314-22927 Capsella grandiflora
Cagra.12686s0005 10.0kb downstream 10.0kb downstream 12514 true Scaffold12686: 9800-22313 Capsella grandiflora
Cagra.12686s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold12686: 9800-19799 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361411 5261 Brassicaceae View MSA
123829824 5264 Brassicales-Malvales View MSA
124346482 5266 SBM View MSA
124251477 5268 Malvidae View MSA
124062981 5270 Rosid View MSA
123744890 5271 Pentapetalae View MSA
122787580 5272 Eudicot View MSA
122046841 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain