Gene : Cagra.12879s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11125 - SUPPRESSOR OF TY 5 Genomic Order:  2
Name:  ? Cagra.12879s0002 Secondary Identifier:  ? PAC:28904282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12879s0002 0.5kb upstream 0.5kb upstream 6534 true Scaffold12879: 4895-11428 Capsella grandiflora
Cagra.12879s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12879: 4895-5394 Capsella grandiflora
Cagra.12879s0002 0.5kb downstream 0.5kb downstream 6534 true Scaffold12879: 5395-11928 Capsella grandiflora
Cagra.12879s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12879: 11429-11928 Capsella grandiflora
Cagra.12879s0002 1.0kb upstream 1.0kb upstream 7034 true Scaffold12879: 4395-11428 Capsella grandiflora
Cagra.12879s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12879: 4395-5394 Capsella grandiflora
Cagra.12879s0002 1.0kb downstream 1.0kb downstream 7034 true Scaffold12879: 5395-12428 Capsella grandiflora
Cagra.12879s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12879: 11429-12428 Capsella grandiflora
Cagra.12879s0002 2.0kb upstream 2.0kb upstream 8034 true Scaffold12879: 3395-11428 Capsella grandiflora
Cagra.12879s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12879: 3395-5394 Capsella grandiflora
Cagra.12879s0002 2.0kb downstream 2.0kb downstream 8034 true Scaffold12879: 5395-13428 Capsella grandiflora
Cagra.12879s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12879: 11429-13428 Capsella grandiflora
Cagra.12879s0002 5.0kb upstream 5.0kb upstream 11034 true Scaffold12879: 395-11428 Capsella grandiflora
Cagra.12879s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12879: 395-5394 Capsella grandiflora
Cagra.12879s0002 5.0kb downstream 5.0kb downstream 11034 true Scaffold12879: 5395-16428 Capsella grandiflora
Cagra.12879s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12879: 11429-16428 Capsella grandiflora
Cagra.12879s0002 10.0kb upstream 10.0kb upstream 11428 true Scaffold12879: 1-11428 Capsella grandiflora
Cagra.12879s0002 10.0kb upstream 10.0kb upstream 5394 false Scaffold12879: 1-5394 Capsella grandiflora
Cagra.12879s0002 10.0kb downstream 10.0kb downstream 16034 true Scaffold12879: 5395-21428 Capsella grandiflora
Cagra.12879s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold12879: 11429-21428 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374742 5261 Brassicaceae View MSA
123837570 5264 Brassicales-Malvales View MSA
124337679 5266 SBM View MSA
124242138 5268 Malvidae View MSA
124066240 5270 Rosid View MSA
123750942 5271 Pentapetalae View MSA
122792427 5272 Eudicot View MSA
122051188 5273 Angiosperm View MSA
121344131 5274 Embryophyte View MSA
123426539 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain