Gene : Cagra.12398s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22593:SF8 - PARALLEL SPINDLE 1 PROTEIN Genomic Order:  5
Name:  ? Cagra.12398s0005 Secondary Identifier:  ? PAC:28909378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12398s0005 0.5kb upstream 0.5kb upstream 5027 true Scaffold12398: 16858-21884 Capsella grandiflora
Cagra.12398s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold12398: 21385-21884 Capsella grandiflora
Cagra.12398s0005 0.5kb downstream 0.5kb downstream 5027 true Scaffold12398: 16358-21384 Capsella grandiflora
Cagra.12398s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold12398: 16358-16857 Capsella grandiflora
Cagra.12398s0005 1.0kb upstream 1.0kb upstream 5527 true Scaffold12398: 16858-22384 Capsella grandiflora
Cagra.12398s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold12398: 21385-22384 Capsella grandiflora
Cagra.12398s0005 1.0kb downstream 1.0kb downstream 5527 true Scaffold12398: 15858-21384 Capsella grandiflora
Cagra.12398s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold12398: 15858-16857 Capsella grandiflora
Cagra.12398s0005 2.0kb upstream 2.0kb upstream 6527 true Scaffold12398: 16858-23384 Capsella grandiflora
Cagra.12398s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold12398: 21385-23384 Capsella grandiflora
Cagra.12398s0005 2.0kb downstream 2.0kb downstream 6527 true Scaffold12398: 14858-21384 Capsella grandiflora
Cagra.12398s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold12398: 14858-16857 Capsella grandiflora
Cagra.12398s0005 5.0kb upstream 5.0kb upstream 9527 true Scaffold12398: 16858-26384 Capsella grandiflora
Cagra.12398s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold12398: 21385-26384 Capsella grandiflora
Cagra.12398s0005 5.0kb downstream 5.0kb downstream 9527 true Scaffold12398: 11858-21384 Capsella grandiflora
Cagra.12398s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold12398: 11858-16857 Capsella grandiflora
Cagra.12398s0005 10.0kb upstream 10.0kb upstream 14527 true Scaffold12398: 16858-31384 Capsella grandiflora
Cagra.12398s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold12398: 21385-31384 Capsella grandiflora
Cagra.12398s0005 10.0kb downstream 10.0kb downstream 14527 true Scaffold12398: 6858-21384 Capsella grandiflora
Cagra.12398s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold12398: 6858-16857 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337760 5261 Brassicaceae View MSA
123838056 5264 Brassicales-Malvales View MSA
124322387 5266 SBM View MSA
124252636 5268 Malvidae View MSA
124069806 5270 Rosid View MSA
123746877 5271 Pentapetalae View MSA
122794534 5272 Eudicot View MSA
122048794 5273 Angiosperm View MSA
121349514 5274 Embryophyte View MSA
123381341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain