Gene : Cagra.11654s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92 Genomic Order:  2
Name:  ? Cagra.11654s0002 Secondary Identifier:  ? PAC:28917414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11654s0002 0.5kb upstream 0.5kb upstream 1721 true Scaffold11654: 10152-11872 Capsella grandiflora
Cagra.11654s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold11654: 10152-10651 Capsella grandiflora
Cagra.11654s0002 0.5kb downstream 0.5kb downstream 1680 true Scaffold11654: 10652-12331 Capsella grandiflora
Cagra.11654s0002 0.5kb downstream 0.5kb downstream 459 false Scaffold11654: 11873-12331 Capsella grandiflora
Cagra.11654s0002 1.0kb upstream 1.0kb upstream 2221 true Scaffold11654: 9652-11872 Capsella grandiflora
Cagra.11654s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold11654: 9652-10651 Capsella grandiflora
Cagra.11654s0002 1.0kb downstream 1.0kb downstream 1680 true Scaffold11654: 10652-12331 Capsella grandiflora
Cagra.11654s0002 1.0kb downstream 1.0kb downstream 459 false Scaffold11654: 11873-12331 Capsella grandiflora
Cagra.11654s0002 2.0kb upstream 2.0kb upstream 3221 true Scaffold11654: 8652-11872 Capsella grandiflora
Cagra.11654s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold11654: 8652-10651 Capsella grandiflora
Cagra.11654s0002 2.0kb downstream 2.0kb downstream 1680 true Scaffold11654: 10652-12331 Capsella grandiflora
Cagra.11654s0002 2.0kb downstream 2.0kb downstream 459 false Scaffold11654: 11873-12331 Capsella grandiflora
Cagra.11654s0002 5.0kb upstream 5.0kb upstream 6221 true Scaffold11654: 5652-11872 Capsella grandiflora
Cagra.11654s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold11654: 5652-10651 Capsella grandiflora
Cagra.11654s0002 5.0kb downstream 5.0kb downstream 1680 true Scaffold11654: 10652-12331 Capsella grandiflora
Cagra.11654s0002 5.0kb downstream 5.0kb downstream 459 false Scaffold11654: 11873-12331 Capsella grandiflora
Cagra.11654s0002 10.0kb upstream 10.0kb upstream 11221 true Scaffold11654: 652-11872 Capsella grandiflora
Cagra.11654s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold11654: 652-10651 Capsella grandiflora
Cagra.11654s0002 10.0kb downstream 10.0kb downstream 1680 true Scaffold11654: 10652-12331 Capsella grandiflora
Cagra.11654s0002 10.0kb downstream 10.0kb downstream 459 false Scaffold11654: 11873-12331 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368637 5261 Brassicaceae View MSA
123829742 5264 Brassicales-Malvales View MSA
124337941 5266 SBM View MSA
124254088 5268 Malvidae View MSA
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain