Gene : Cagra.11658s0002 C. grandiflora v1.1
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  2
Name:  ? Cagra.11658s0002 Secondary Identifier:  ? PAC:28907630
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5097 Capsella grandiflora pathologic  
Cgrandiflora PWY-724 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11658s0002 0.5kb upstream 0.5kb upstream 3345 true Scaffold11658: 5742-9086 Capsella grandiflora
Cagra.11658s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold11658: 8587-9086 Capsella grandiflora
Cagra.11658s0002 0.5kb downstream 0.5kb downstream 3345 true Scaffold11658: 5242-8586 Capsella grandiflora
Cagra.11658s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold11658: 5242-5741 Capsella grandiflora
Cagra.11658s0002 1.0kb upstream 1.0kb upstream 3845 true Scaffold11658: 5742-9586 Capsella grandiflora
Cagra.11658s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold11658: 8587-9586 Capsella grandiflora
Cagra.11658s0002 1.0kb downstream 1.0kb downstream 3845 true Scaffold11658: 4742-8586 Capsella grandiflora
Cagra.11658s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold11658: 4742-5741 Capsella grandiflora
Cagra.11658s0002 2.0kb upstream 2.0kb upstream 4845 true Scaffold11658: 5742-10586 Capsella grandiflora
Cagra.11658s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold11658: 8587-10586 Capsella grandiflora
Cagra.11658s0002 2.0kb downstream 2.0kb downstream 4845 true Scaffold11658: 3742-8586 Capsella grandiflora
Cagra.11658s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold11658: 3742-5741 Capsella grandiflora
Cagra.11658s0002 5.0kb upstream 5.0kb upstream 7845 true Scaffold11658: 5742-13586 Capsella grandiflora
Cagra.11658s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold11658: 8587-13586 Capsella grandiflora
Cagra.11658s0002 5.0kb downstream 5.0kb downstream 7845 true Scaffold11658: 742-8586 Capsella grandiflora
Cagra.11658s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold11658: 742-5741 Capsella grandiflora
Cagra.11658s0002 10.0kb upstream 10.0kb upstream 12845 true Scaffold11658: 5742-18586 Capsella grandiflora
Cagra.11658s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold11658: 8587-18586 Capsella grandiflora
Cagra.11658s0002 10.0kb downstream 10.0kb downstream 8586 true Scaffold11658: 1-8586 Capsella grandiflora
Cagra.11658s0002 10.0kb downstream 10.0kb downstream 5741 false Scaffold11658: 1-5741 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381110 5261 Brassicaceae View MSA
123803060 5264 Brassicales-Malvales View MSA
124300197 5266 SBM View MSA
124252486 5268 Malvidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain