Gene : Cagra.10862s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21704:SF19 - EXPRESSED PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.10862s0003 Secondary Identifier:  ? PAC:28914577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10862s0003 0.5kb upstream 0.5kb upstream 3013 true Scaffold10862: 11190-14202 Capsella grandiflora
Cagra.10862s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold10862: 11190-11689 Capsella grandiflora
Cagra.10862s0003 0.5kb downstream 0.5kb downstream 3013 true Scaffold10862: 11690-14702 Capsella grandiflora
Cagra.10862s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold10862: 14203-14702 Capsella grandiflora
Cagra.10862s0003 1.0kb upstream 1.0kb upstream 3513 true Scaffold10862: 10690-14202 Capsella grandiflora
Cagra.10862s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold10862: 10690-11689 Capsella grandiflora
Cagra.10862s0003 1.0kb downstream 1.0kb downstream 3513 true Scaffold10862: 11690-15202 Capsella grandiflora
Cagra.10862s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold10862: 14203-15202 Capsella grandiflora
Cagra.10862s0003 2.0kb upstream 2.0kb upstream 4513 true Scaffold10862: 9690-14202 Capsella grandiflora
Cagra.10862s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold10862: 9690-11689 Capsella grandiflora
Cagra.10862s0003 2.0kb downstream 2.0kb downstream 4513 true Scaffold10862: 11690-16202 Capsella grandiflora
Cagra.10862s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold10862: 14203-16202 Capsella grandiflora
Cagra.10862s0003 5.0kb upstream 5.0kb upstream 7513 true Scaffold10862: 6690-14202 Capsella grandiflora
Cagra.10862s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold10862: 6690-11689 Capsella grandiflora
Cagra.10862s0003 5.0kb downstream 5.0kb downstream 7513 true Scaffold10862: 11690-19202 Capsella grandiflora
Cagra.10862s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold10862: 14203-19202 Capsella grandiflora
Cagra.10862s0003 10.0kb upstream 10.0kb upstream 12513 true Scaffold10862: 1690-14202 Capsella grandiflora
Cagra.10862s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold10862: 1690-11689 Capsella grandiflora
Cagra.10862s0003 10.0kb downstream 10.0kb downstream 12513 true Scaffold10862: 11690-24202 Capsella grandiflora
Cagra.10862s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold10862: 14203-24202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366197 5261 Brassicaceae View MSA
123837321 5264 Brassicales-Malvales View MSA
124343473 5266 SBM View MSA
124245139 5268 Malvidae View MSA
124050567 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain