Gene : Cagra.10917s0001 C. grandiflora v1.1
Defline:  (1 of 5) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Genomic Order:  1
Name:  ? Cagra.10917s0001 Secondary Identifier:  ? PAC:28915421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10917s0001 0.5kb upstream 0.5kb upstream 2098 true Scaffold10917: 1-2098 Capsella grandiflora
Cagra.10917s0001 0.5kb upstream 0.5kb upstream 71 false Scaffold10917: 1-71 Capsella grandiflora
Cagra.10917s0001 0.5kb downstream 0.5kb downstream 2527 true Scaffold10917: 72-2598 Capsella grandiflora
Cagra.10917s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10917: 2099-2598 Capsella grandiflora
Cagra.10917s0001 1.0kb upstream 1.0kb upstream 2098 true Scaffold10917: 1-2098 Capsella grandiflora
Cagra.10917s0001 1.0kb upstream 1.0kb upstream 71 false Scaffold10917: 1-71 Capsella grandiflora
Cagra.10917s0001 1.0kb downstream 1.0kb downstream 3027 true Scaffold10917: 72-3098 Capsella grandiflora
Cagra.10917s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10917: 2099-3098 Capsella grandiflora
Cagra.10917s0001 2.0kb upstream 2.0kb upstream 2098 true Scaffold10917: 1-2098 Capsella grandiflora
Cagra.10917s0001 2.0kb upstream 2.0kb upstream 71 false Scaffold10917: 1-71 Capsella grandiflora
Cagra.10917s0001 2.0kb downstream 2.0kb downstream 4027 true Scaffold10917: 72-4098 Capsella grandiflora
Cagra.10917s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10917: 2099-4098 Capsella grandiflora
Cagra.10917s0001 5.0kb upstream 5.0kb upstream 2098 true Scaffold10917: 1-2098 Capsella grandiflora
Cagra.10917s0001 5.0kb upstream 5.0kb upstream 71 false Scaffold10917: 1-71 Capsella grandiflora
Cagra.10917s0001 5.0kb downstream 5.0kb downstream 7027 true Scaffold10917: 72-7098 Capsella grandiflora
Cagra.10917s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10917: 2099-7098 Capsella grandiflora
Cagra.10917s0001 10.0kb upstream 10.0kb upstream 2098 true Scaffold10917: 1-2098 Capsella grandiflora
Cagra.10917s0001 10.0kb upstream 10.0kb upstream 71 false Scaffold10917: 1-71 Capsella grandiflora
Cagra.10917s0001 10.0kb downstream 10.0kb downstream 12027 true Scaffold10917: 72-12098 Capsella grandiflora
Cagra.10917s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold10917: 2099-12098 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360382 5261 Brassicaceae View MSA
123828808 5264 Brassicales-Malvales View MSA
124345004 5266 SBM View MSA
124240655 5268 Malvidae View MSA
124072152 5270 Rosid View MSA
123751059 5271 Pentapetalae View MSA
122790326 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain