Gene : Cagra.11598s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19248 - ATP-BINDING TRANSPORT PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.11598s0003 Secondary Identifier:  ? PAC:28911149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11598s0003 0.5kb upstream 0.5kb upstream 4861 true Scaffold11598: 19184-24044 Capsella grandiflora
Cagra.11598s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11598: 23545-24044 Capsella grandiflora
Cagra.11598s0003 0.5kb downstream 0.5kb downstream 4861 true Scaffold11598: 18684-23544 Capsella grandiflora
Cagra.11598s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11598: 18684-19183 Capsella grandiflora
Cagra.11598s0003 1.0kb upstream 1.0kb upstream 5361 true Scaffold11598: 19184-24544 Capsella grandiflora
Cagra.11598s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11598: 23545-24544 Capsella grandiflora
Cagra.11598s0003 1.0kb downstream 1.0kb downstream 5361 true Scaffold11598: 18184-23544 Capsella grandiflora
Cagra.11598s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11598: 18184-19183 Capsella grandiflora
Cagra.11598s0003 2.0kb upstream 2.0kb upstream 6361 true Scaffold11598: 19184-25544 Capsella grandiflora
Cagra.11598s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11598: 23545-25544 Capsella grandiflora
Cagra.11598s0003 2.0kb downstream 2.0kb downstream 6361 true Scaffold11598: 17184-23544 Capsella grandiflora
Cagra.11598s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11598: 17184-19183 Capsella grandiflora
Cagra.11598s0003 5.0kb upstream 5.0kb upstream 9361 true Scaffold11598: 19184-28544 Capsella grandiflora
Cagra.11598s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11598: 23545-28544 Capsella grandiflora
Cagra.11598s0003 5.0kb downstream 5.0kb downstream 9361 true Scaffold11598: 14184-23544 Capsella grandiflora
Cagra.11598s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11598: 14184-19183 Capsella grandiflora
Cagra.11598s0003 10.0kb upstream 10.0kb upstream 14361 true Scaffold11598: 19184-33544 Capsella grandiflora
Cagra.11598s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold11598: 23545-33544 Capsella grandiflora
Cagra.11598s0003 10.0kb downstream 10.0kb downstream 14361 true Scaffold11598: 9184-23544 Capsella grandiflora
Cagra.11598s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11598: 9184-19183 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379775 5261 Brassicaceae View MSA
123830991 5264 Brassicales-Malvales View MSA
124343066 5266 SBM View MSA
124239604 5268 Malvidae View MSA
124066840 5270 Rosid View MSA
123740419 5271 Pentapetalae View MSA
122788319 5272 Eudicot View MSA
122044916 5273 Angiosperm View MSA
121350229 5274 Embryophyte View MSA
123428557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain