Gene : Cagra.11101s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF73 - METALLOPROTEASE M41 FTSH Genomic Order:  1
Name:  ? Cagra.11101s0001 Secondary Identifier:  ? PAC:28918176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11101s0001 0.5kb upstream 0.5kb upstream 4282 true Scaffold11101: 744-5025 Capsella grandiflora
Cagra.11101s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold11101: 744-1243 Capsella grandiflora
Cagra.11101s0001 0.5kb downstream 0.5kb downstream 4282 true Scaffold11101: 1244-5525 Capsella grandiflora
Cagra.11101s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold11101: 5026-5525 Capsella grandiflora
Cagra.11101s0001 1.0kb upstream 1.0kb upstream 4782 true Scaffold11101: 244-5025 Capsella grandiflora
Cagra.11101s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold11101: 244-1243 Capsella grandiflora
Cagra.11101s0001 1.0kb downstream 1.0kb downstream 4782 true Scaffold11101: 1244-6025 Capsella grandiflora
Cagra.11101s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold11101: 5026-6025 Capsella grandiflora
Cagra.11101s0001 2.0kb upstream 2.0kb upstream 5025 true Scaffold11101: 1-5025 Capsella grandiflora
Cagra.11101s0001 2.0kb upstream 2.0kb upstream 1243 false Scaffold11101: 1-1243 Capsella grandiflora
Cagra.11101s0001 2.0kb downstream 2.0kb downstream 5782 true Scaffold11101: 1244-7025 Capsella grandiflora
Cagra.11101s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold11101: 5026-7025 Capsella grandiflora
Cagra.11101s0001 5.0kb upstream 5.0kb upstream 5025 true Scaffold11101: 1-5025 Capsella grandiflora
Cagra.11101s0001 5.0kb upstream 5.0kb upstream 1243 false Scaffold11101: 1-1243 Capsella grandiflora
Cagra.11101s0001 5.0kb downstream 5.0kb downstream 8782 true Scaffold11101: 1244-10025 Capsella grandiflora
Cagra.11101s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold11101: 5026-10025 Capsella grandiflora
Cagra.11101s0001 10.0kb upstream 10.0kb upstream 5025 true Scaffold11101: 1-5025 Capsella grandiflora
Cagra.11101s0001 10.0kb upstream 10.0kb upstream 1243 false Scaffold11101: 1-1243 Capsella grandiflora
Cagra.11101s0001 10.0kb downstream 10.0kb downstream 11025 true Scaffold11101: 1244-12268 Capsella grandiflora
Cagra.11101s0001 10.0kb downstream 10.0kb downstream 7243 false Scaffold11101: 5026-12268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370265 5261 Brassicaceae View MSA
123837479 5264 Brassicales-Malvales View MSA
124337997 5266 SBM View MSA
124253542 5268 Malvidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain