Gene : Cagra.10702s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Genomic Order:  9
Name:  ? Cagra.10702s0009 Secondary Identifier:  ? PAC:28897215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10702s0009 0.5kb upstream 0.5kb upstream 2940 true Scaffold10702: 36810-39749 Capsella grandiflora
Cagra.10702s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold10702: 39250-39749 Capsella grandiflora
Cagra.10702s0009 0.5kb downstream 0.5kb downstream 2940 true Scaffold10702: 36310-39249 Capsella grandiflora
Cagra.10702s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold10702: 36310-36809 Capsella grandiflora
Cagra.10702s0009 1.0kb upstream 1.0kb upstream 3440 true Scaffold10702: 36810-40249 Capsella grandiflora
Cagra.10702s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold10702: 39250-40249 Capsella grandiflora
Cagra.10702s0009 1.0kb downstream 1.0kb downstream 3440 true Scaffold10702: 35810-39249 Capsella grandiflora
Cagra.10702s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold10702: 35810-36809 Capsella grandiflora
Cagra.10702s0009 2.0kb upstream 2.0kb upstream 4440 true Scaffold10702: 36810-41249 Capsella grandiflora
Cagra.10702s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold10702: 39250-41249 Capsella grandiflora
Cagra.10702s0009 2.0kb downstream 2.0kb downstream 4440 true Scaffold10702: 34810-39249 Capsella grandiflora
Cagra.10702s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold10702: 34810-36809 Capsella grandiflora
Cagra.10702s0009 5.0kb upstream 5.0kb upstream 6042 true Scaffold10702: 36810-42851 Capsella grandiflora
Cagra.10702s0009 5.0kb upstream 5.0kb upstream 3602 false Scaffold10702: 39250-42851 Capsella grandiflora
Cagra.10702s0009 5.0kb downstream 5.0kb downstream 7440 true Scaffold10702: 31810-39249 Capsella grandiflora
Cagra.10702s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold10702: 31810-36809 Capsella grandiflora
Cagra.10702s0009 10.0kb upstream 10.0kb upstream 6042 true Scaffold10702: 36810-42851 Capsella grandiflora
Cagra.10702s0009 10.0kb upstream 10.0kb upstream 3602 false Scaffold10702: 39250-42851 Capsella grandiflora
Cagra.10702s0009 10.0kb downstream 10.0kb downstream 12440 true Scaffold10702: 26810-39249 Capsella grandiflora
Cagra.10702s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold10702: 26810-36809 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363267 5261 Brassicaceae View MSA
123834531 5264 Brassicales-Malvales View MSA
124342312 5266 SBM View MSA
124237652 5268 Malvidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain