Gene : Cagra.10399s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11040:SF46 - PROTEIN ZNTB Genomic Order:  9
Name:  ? Cagra.10399s0009 Secondary Identifier:  ? PAC:28906541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10399s0009 0.5kb upstream 0.5kb upstream 3803 true Scaffold10399: 28547-32349 Capsella grandiflora
Cagra.10399s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold10399: 28547-29046 Capsella grandiflora
Cagra.10399s0009 0.5kb downstream 0.5kb downstream 3803 true Scaffold10399: 29047-32849 Capsella grandiflora
Cagra.10399s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold10399: 32350-32849 Capsella grandiflora
Cagra.10399s0009 1.0kb upstream 1.0kb upstream 4303 true Scaffold10399: 28047-32349 Capsella grandiflora
Cagra.10399s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold10399: 28047-29046 Capsella grandiflora
Cagra.10399s0009 1.0kb downstream 1.0kb downstream 4303 true Scaffold10399: 29047-33349 Capsella grandiflora
Cagra.10399s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold10399: 32350-33349 Capsella grandiflora
Cagra.10399s0009 2.0kb upstream 2.0kb upstream 5303 true Scaffold10399: 27047-32349 Capsella grandiflora
Cagra.10399s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold10399: 27047-29046 Capsella grandiflora
Cagra.10399s0009 2.0kb downstream 2.0kb downstream 5303 true Scaffold10399: 29047-34349 Capsella grandiflora
Cagra.10399s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold10399: 32350-34349 Capsella grandiflora
Cagra.10399s0009 5.0kb upstream 5.0kb upstream 8303 true Scaffold10399: 24047-32349 Capsella grandiflora
Cagra.10399s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold10399: 24047-29046 Capsella grandiflora
Cagra.10399s0009 5.0kb downstream 5.0kb downstream 8303 true Scaffold10399: 29047-37349 Capsella grandiflora
Cagra.10399s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold10399: 32350-37349 Capsella grandiflora
Cagra.10399s0009 10.0kb upstream 10.0kb upstream 13303 true Scaffold10399: 19047-32349 Capsella grandiflora
Cagra.10399s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold10399: 19047-29046 Capsella grandiflora
Cagra.10399s0009 10.0kb downstream 10.0kb downstream 13303 true Scaffold10399: 29047-42349 Capsella grandiflora
Cagra.10399s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold10399: 32350-42349 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372120 5261 Brassicaceae View MSA
123828558 5264 Brassicales-Malvales View MSA
124339655 5266 SBM View MSA
124249598 5268 Malvidae View MSA
124067463 5270 Rosid View MSA
123737125 5271 Pentapetalae View MSA
122787735 5272 Eudicot View MSA
122050500 5273 Angiosperm View MSA
121344991 5274 Embryophyte View MSA
123426288 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain