Gene : Cagra.10427s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14374 - FOIE GRAS Genomic Order:  3
Name:  ? Cagra.10427s0003 Secondary Identifier:  ? PAC:28917459
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10427s0003 0.5kb upstream 0.5kb upstream 5498 true Scaffold10427: 11790-17287 Capsella grandiflora
Cagra.10427s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold10427: 11790-12289 Capsella grandiflora
Cagra.10427s0003 0.5kb downstream 0.5kb downstream 5498 true Scaffold10427: 12290-17787 Capsella grandiflora
Cagra.10427s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold10427: 17288-17787 Capsella grandiflora
Cagra.10427s0003 1.0kb upstream 1.0kb upstream 5998 true Scaffold10427: 11290-17287 Capsella grandiflora
Cagra.10427s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold10427: 11290-12289 Capsella grandiflora
Cagra.10427s0003 1.0kb downstream 1.0kb downstream 5998 true Scaffold10427: 12290-18287 Capsella grandiflora
Cagra.10427s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold10427: 17288-18287 Capsella grandiflora
Cagra.10427s0003 2.0kb upstream 2.0kb upstream 6998 true Scaffold10427: 10290-17287 Capsella grandiflora
Cagra.10427s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold10427: 10290-12289 Capsella grandiflora
Cagra.10427s0003 2.0kb downstream 2.0kb downstream 6998 true Scaffold10427: 12290-19287 Capsella grandiflora
Cagra.10427s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold10427: 17288-19287 Capsella grandiflora
Cagra.10427s0003 5.0kb upstream 5.0kb upstream 9998 true Scaffold10427: 7290-17287 Capsella grandiflora
Cagra.10427s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold10427: 7290-12289 Capsella grandiflora
Cagra.10427s0003 5.0kb downstream 5.0kb downstream 9998 true Scaffold10427: 12290-22287 Capsella grandiflora
Cagra.10427s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold10427: 17288-22287 Capsella grandiflora
Cagra.10427s0003 10.0kb upstream 10.0kb upstream 14998 true Scaffold10427: 2290-17287 Capsella grandiflora
Cagra.10427s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold10427: 2290-12289 Capsella grandiflora
Cagra.10427s0003 10.0kb downstream 10.0kb downstream 14998 true Scaffold10427: 12290-27287 Capsella grandiflora
Cagra.10427s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold10427: 17288-27287 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373007 5261 Brassicaceae View MSA
123827740 5264 Brassicales-Malvales View MSA
124336499 5266 SBM View MSA
124241533 5268 Malvidae View MSA
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain