Gene : Cagra.9666s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13301:SF53 - CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED Genomic Order:  1
Name:  ? Cagra.9666s0001 Secondary Identifier:  ? PAC:28908132
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1001 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9666s0001 0.5kb upstream 0.5kb upstream 1969 true Scaffold9666: 27-1995 Capsella grandiflora
Cagra.9666s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold9666: 1995-1995 Capsella grandiflora
Cagra.9666s0001 0.5kb downstream 0.5kb downstream 1994 true Scaffold9666: 1-1994 Capsella grandiflora
Cagra.9666s0001 0.5kb downstream 0.5kb downstream 26 false Scaffold9666: 1-26 Capsella grandiflora
Cagra.9666s0001 1.0kb upstream 1.0kb upstream 1969 true Scaffold9666: 27-1995 Capsella grandiflora
Cagra.9666s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold9666: 1995-1995 Capsella grandiflora
Cagra.9666s0001 1.0kb downstream 1.0kb downstream 1994 true Scaffold9666: 1-1994 Capsella grandiflora
Cagra.9666s0001 1.0kb downstream 1.0kb downstream 26 false Scaffold9666: 1-26 Capsella grandiflora
Cagra.9666s0001 2.0kb upstream 2.0kb upstream 1969 true Scaffold9666: 27-1995 Capsella grandiflora
Cagra.9666s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold9666: 1995-1995 Capsella grandiflora
Cagra.9666s0001 2.0kb downstream 2.0kb downstream 1994 true Scaffold9666: 1-1994 Capsella grandiflora
Cagra.9666s0001 2.0kb downstream 2.0kb downstream 26 false Scaffold9666: 1-26 Capsella grandiflora
Cagra.9666s0001 5.0kb upstream 5.0kb upstream 1969 true Scaffold9666: 27-1995 Capsella grandiflora
Cagra.9666s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold9666: 1995-1995 Capsella grandiflora
Cagra.9666s0001 5.0kb downstream 5.0kb downstream 1994 true Scaffold9666: 1-1994 Capsella grandiflora
Cagra.9666s0001 5.0kb downstream 5.0kb downstream 26 false Scaffold9666: 1-26 Capsella grandiflora
Cagra.9666s0001 10.0kb upstream 10.0kb upstream 1969 true Scaffold9666: 27-1995 Capsella grandiflora
Cagra.9666s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold9666: 1995-1995 Capsella grandiflora
Cagra.9666s0001 10.0kb downstream 10.0kb downstream 1994 true Scaffold9666: 1-1994 Capsella grandiflora
Cagra.9666s0001 10.0kb downstream 10.0kb downstream 26 false Scaffold9666: 1-26 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343850 5261 Brassicaceae View MSA
123783941 5264 Brassicales-Malvales View MSA
124349744 5266 SBM View MSA
124254069 5268 Malvidae View MSA
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain