Gene : Cagra.9729s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Cagra.9729s0002 Secondary Identifier:  ? PAC:28908199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9729s0002 0.5kb upstream 0.5kb upstream 1896 true Scaffold9729: 4840-6735 Capsella grandiflora
Cagra.9729s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9729: 4840-5339 Capsella grandiflora
Cagra.9729s0002 0.5kb downstream 0.5kb downstream 1896 true Scaffold9729: 5340-7235 Capsella grandiflora
Cagra.9729s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9729: 6736-7235 Capsella grandiflora
Cagra.9729s0002 1.0kb upstream 1.0kb upstream 2396 true Scaffold9729: 4340-6735 Capsella grandiflora
Cagra.9729s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9729: 4340-5339 Capsella grandiflora
Cagra.9729s0002 1.0kb downstream 1.0kb downstream 2396 true Scaffold9729: 5340-7735 Capsella grandiflora
Cagra.9729s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9729: 6736-7735 Capsella grandiflora
Cagra.9729s0002 2.0kb upstream 2.0kb upstream 3396 true Scaffold9729: 3340-6735 Capsella grandiflora
Cagra.9729s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9729: 3340-5339 Capsella grandiflora
Cagra.9729s0002 2.0kb downstream 2.0kb downstream 3396 true Scaffold9729: 5340-8735 Capsella grandiflora
Cagra.9729s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9729: 6736-8735 Capsella grandiflora
Cagra.9729s0002 5.0kb upstream 5.0kb upstream 6396 true Scaffold9729: 340-6735 Capsella grandiflora
Cagra.9729s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold9729: 340-5339 Capsella grandiflora
Cagra.9729s0002 5.0kb downstream 5.0kb downstream 6396 true Scaffold9729: 5340-11735 Capsella grandiflora
Cagra.9729s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold9729: 6736-11735 Capsella grandiflora
Cagra.9729s0002 10.0kb upstream 10.0kb upstream 6735 true Scaffold9729: 1-6735 Capsella grandiflora
Cagra.9729s0002 10.0kb upstream 10.0kb upstream 5339 false Scaffold9729: 1-5339 Capsella grandiflora
Cagra.9729s0002 10.0kb downstream 10.0kb downstream 6466 true Scaffold9729: 5340-11805 Capsella grandiflora
Cagra.9729s0002 10.0kb downstream 10.0kb downstream 5070 false Scaffold9729: 6736-11805 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377358 5261 Brassicaceae View MSA
123801509 5264 Brassicales-Malvales View MSA
124298804 5266 SBM View MSA
124150366 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain