Gene : Cagra.9908s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23241:SF65 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.9908s0002 Secondary Identifier:  ? PAC:28916380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9908s0002 0.5kb upstream 0.5kb upstream 1769 true Scaffold9908: 1937-3705 Capsella grandiflora
Cagra.9908s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold9908: 1937-2436 Capsella grandiflora
Cagra.9908s0002 0.5kb downstream 0.5kb downstream 1769 true Scaffold9908: 2437-4205 Capsella grandiflora
Cagra.9908s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold9908: 3706-4205 Capsella grandiflora
Cagra.9908s0002 1.0kb upstream 1.0kb upstream 2269 true Scaffold9908: 1437-3705 Capsella grandiflora
Cagra.9908s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold9908: 1437-2436 Capsella grandiflora
Cagra.9908s0002 1.0kb downstream 1.0kb downstream 2269 true Scaffold9908: 2437-4705 Capsella grandiflora
Cagra.9908s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold9908: 3706-4705 Capsella grandiflora
Cagra.9908s0002 2.0kb upstream 2.0kb upstream 3269 true Scaffold9908: 437-3705 Capsella grandiflora
Cagra.9908s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold9908: 437-2436 Capsella grandiflora
Cagra.9908s0002 2.0kb downstream 2.0kb downstream 3269 true Scaffold9908: 2437-5705 Capsella grandiflora
Cagra.9908s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold9908: 3706-5705 Capsella grandiflora
Cagra.9908s0002 5.0kb upstream 5.0kb upstream 3705 true Scaffold9908: 1-3705 Capsella grandiflora
Cagra.9908s0002 5.0kb upstream 5.0kb upstream 2436 false Scaffold9908: 1-2436 Capsella grandiflora
Cagra.9908s0002 5.0kb downstream 5.0kb downstream 6269 true Scaffold9908: 2437-8705 Capsella grandiflora
Cagra.9908s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold9908: 3706-8705 Capsella grandiflora
Cagra.9908s0002 10.0kb upstream 10.0kb upstream 3705 true Scaffold9908: 1-3705 Capsella grandiflora
Cagra.9908s0002 10.0kb upstream 10.0kb upstream 2436 false Scaffold9908: 1-2436 Capsella grandiflora
Cagra.9908s0002 10.0kb downstream 10.0kb downstream 11269 true Scaffold9908: 2437-13705 Capsella grandiflora
Cagra.9908s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold9908: 3706-13705 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373033 5261 Brassicaceae View MSA
123841274 5264 Brassicales-Malvales View MSA
124341278 5266 SBM View MSA
124250059 5268 Malvidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain