Gene : Cagra.16835s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.16835s0001
Secondary Identifier:  ? PAC:28900842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16835s0001 0.5kb upstream 0.5kb upstream 2027 true Scaffold16835: 1-2027 Capsella grandiflora
Cagra.16835s0001 0.5kb upstream 0.5kb upstream 323 false Scaffold16835: 1-323 Capsella grandiflora
Cagra.16835s0001 0.5kb downstream 0.5kb downstream 2204 true Scaffold16835: 324-2527 Capsella grandiflora
Cagra.16835s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16835: 2028-2527 Capsella grandiflora
Cagra.16835s0001 1.0kb upstream 1.0kb upstream 2027 true Scaffold16835: 1-2027 Capsella grandiflora
Cagra.16835s0001 1.0kb upstream 1.0kb upstream 323 false Scaffold16835: 1-323 Capsella grandiflora
Cagra.16835s0001 1.0kb downstream 1.0kb downstream 2704 true Scaffold16835: 324-3027 Capsella grandiflora
Cagra.16835s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16835: 2028-3027 Capsella grandiflora
Cagra.16835s0001 2.0kb upstream 2.0kb upstream 2027 true Scaffold16835: 1-2027 Capsella grandiflora
Cagra.16835s0001 2.0kb upstream 2.0kb upstream 323 false Scaffold16835: 1-323 Capsella grandiflora
Cagra.16835s0001 2.0kb downstream 2.0kb downstream 3704 true Scaffold16835: 324-4027 Capsella grandiflora
Cagra.16835s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16835: 2028-4027 Capsella grandiflora
Cagra.16835s0001 5.0kb upstream 5.0kb upstream 2027 true Scaffold16835: 1-2027 Capsella grandiflora
Cagra.16835s0001 5.0kb upstream 5.0kb upstream 323 false Scaffold16835: 1-323 Capsella grandiflora
Cagra.16835s0001 5.0kb downstream 5.0kb downstream 6704 true Scaffold16835: 324-7027 Capsella grandiflora
Cagra.16835s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16835: 2028-7027 Capsella grandiflora
Cagra.16835s0001 10.0kb upstream 10.0kb upstream 2027 true Scaffold16835: 1-2027 Capsella grandiflora
Cagra.16835s0001 10.0kb upstream 10.0kb upstream 323 false Scaffold16835: 1-323 Capsella grandiflora
Cagra.16835s0001 10.0kb downstream 10.0kb downstream 10279 true Scaffold16835: 324-10602 Capsella grandiflora
Cagra.16835s0001 10.0kb downstream 10.0kb downstream 8575 false Scaffold16835: 2028-10602 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371478 5261 Brassicaceae View MSA
122795245 5272 Eudicot View MSA
123800169 5264 Brassicales-Malvales View MSA
124297614 5266 SBM View MSA
124249156 5268 Malvidae View MSA
124070162 5270 Rosid View MSA
123742599 5271 Pentapetalae View MSA
122050165 5273 Angiosperm View MSA
121311772 5274 Embryophyte View MSA
123349025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain