Gene : Cagra.17591s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24093:SF257 - ATPASE 6, PLASMA MEMBRANE-TYPE Genomic Order:  1
Name:  ? Cagra.17591s0001 Secondary Identifier:  ? PAC:28908127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17591s0001 0.5kb upstream 0.5kb upstream 4276 true Scaffold17591: 200-4475 Capsella grandiflora
Cagra.17591s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17591: 200-699 Capsella grandiflora
Cagra.17591s0001 0.5kb downstream 0.5kb downstream 4276 true Scaffold17591: 700-4975 Capsella grandiflora
Cagra.17591s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17591: 4476-4975 Capsella grandiflora
Cagra.17591s0001 1.0kb upstream 1.0kb upstream 4475 true Scaffold17591: 1-4475 Capsella grandiflora
Cagra.17591s0001 1.0kb upstream 1.0kb upstream 699 false Scaffold17591: 1-699 Capsella grandiflora
Cagra.17591s0001 1.0kb downstream 1.0kb downstream 4776 true Scaffold17591: 700-5475 Capsella grandiflora
Cagra.17591s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold17591: 4476-5475 Capsella grandiflora
Cagra.17591s0001 2.0kb upstream 2.0kb upstream 4475 true Scaffold17591: 1-4475 Capsella grandiflora
Cagra.17591s0001 2.0kb upstream 2.0kb upstream 699 false Scaffold17591: 1-699 Capsella grandiflora
Cagra.17591s0001 2.0kb downstream 2.0kb downstream 5776 true Scaffold17591: 700-6475 Capsella grandiflora
Cagra.17591s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold17591: 4476-6475 Capsella grandiflora
Cagra.17591s0001 5.0kb upstream 5.0kb upstream 4475 true Scaffold17591: 1-4475 Capsella grandiflora
Cagra.17591s0001 5.0kb upstream 5.0kb upstream 699 false Scaffold17591: 1-699 Capsella grandiflora
Cagra.17591s0001 5.0kb downstream 5.0kb downstream 8776 true Scaffold17591: 700-9475 Capsella grandiflora
Cagra.17591s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold17591: 4476-9475 Capsella grandiflora
Cagra.17591s0001 10.0kb upstream 10.0kb upstream 4475 true Scaffold17591: 1-4475 Capsella grandiflora
Cagra.17591s0001 10.0kb upstream 10.0kb upstream 699 false Scaffold17591: 1-699 Capsella grandiflora
Cagra.17591s0001 10.0kb downstream 10.0kb downstream 13776 true Scaffold17591: 700-14475 Capsella grandiflora
Cagra.17591s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold17591: 4476-14475 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369785 5261 Brassicaceae View MSA
123836333 5264 Brassicales-Malvales View MSA
124340220 5266 SBM View MSA
124250534 5268 Malvidae View MSA
124070972 5270 Rosid View MSA
123741825 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain