Gene : Cagra.17854s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Genomic Order:  2
Name:  ? Cagra.17854s0002 Secondary Identifier:  ? PAC:28906384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17854s0002 0.5kb upstream 0.5kb upstream 6662 true Scaffold17854: 4764-11425 Capsella grandiflora
Cagra.17854s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold17854: 10926-11425 Capsella grandiflora
Cagra.17854s0002 0.5kb downstream 0.5kb downstream 6662 true Scaffold17854: 4264-10925 Capsella grandiflora
Cagra.17854s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold17854: 4264-4763 Capsella grandiflora
Cagra.17854s0002 1.0kb upstream 1.0kb upstream 7162 true Scaffold17854: 4764-11925 Capsella grandiflora
Cagra.17854s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold17854: 10926-11925 Capsella grandiflora
Cagra.17854s0002 1.0kb downstream 1.0kb downstream 7162 true Scaffold17854: 3764-10925 Capsella grandiflora
Cagra.17854s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold17854: 3764-4763 Capsella grandiflora
Cagra.17854s0002 2.0kb upstream 2.0kb upstream 8162 true Scaffold17854: 4764-12925 Capsella grandiflora
Cagra.17854s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold17854: 10926-12925 Capsella grandiflora
Cagra.17854s0002 2.0kb downstream 2.0kb downstream 8162 true Scaffold17854: 2764-10925 Capsella grandiflora
Cagra.17854s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold17854: 2764-4763 Capsella grandiflora
Cagra.17854s0002 5.0kb upstream 5.0kb upstream 9203 true Scaffold17854: 4764-13966 Capsella grandiflora
Cagra.17854s0002 5.0kb upstream 5.0kb upstream 3041 false Scaffold17854: 10926-13966 Capsella grandiflora
Cagra.17854s0002 5.0kb downstream 5.0kb downstream 10925 true Scaffold17854: 1-10925 Capsella grandiflora
Cagra.17854s0002 5.0kb downstream 5.0kb downstream 4763 false Scaffold17854: 1-4763 Capsella grandiflora
Cagra.17854s0002 10.0kb upstream 10.0kb upstream 9203 true Scaffold17854: 4764-13966 Capsella grandiflora
Cagra.17854s0002 10.0kb upstream 10.0kb upstream 3041 false Scaffold17854: 10926-13966 Capsella grandiflora
Cagra.17854s0002 10.0kb downstream 10.0kb downstream 10925 true Scaffold17854: 1-10925 Capsella grandiflora
Cagra.17854s0002 10.0kb downstream 10.0kb downstream 4763 false Scaffold17854: 1-4763 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364432 5261 Brassicaceae View MSA
123830954 5264 Brassicales-Malvales View MSA
124339290 5266 SBM View MSA
124242021 5268 Malvidae View MSA
124065286 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain