Gene : Cagra.16484s0001 C. grandiflora v1.1
Defline:  (1 of 12) PF05970 - PIF1-like helicase (PIF1) Genomic Order:  1
Name:  ? Cagra.16484s0001 Secondary Identifier:  ? PAC:28908532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16484s0001 0.5kb upstream 0.5kb upstream 1779 true Scaffold16484: 1206-2984 Capsella grandiflora
Cagra.16484s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold16484: 2485-2984 Capsella grandiflora
Cagra.16484s0001 0.5kb downstream 0.5kb downstream 1779 true Scaffold16484: 706-2484 Capsella grandiflora
Cagra.16484s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16484: 706-1205 Capsella grandiflora
Cagra.16484s0001 1.0kb upstream 1.0kb upstream 2159 true Scaffold16484: 1206-3364 Capsella grandiflora
Cagra.16484s0001 1.0kb upstream 1.0kb upstream 880 false Scaffold16484: 2485-3364 Capsella grandiflora
Cagra.16484s0001 1.0kb downstream 1.0kb downstream 2279 true Scaffold16484: 206-2484 Capsella grandiflora
Cagra.16484s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16484: 206-1205 Capsella grandiflora
Cagra.16484s0001 2.0kb upstream 2.0kb upstream 2159 true Scaffold16484: 1206-3364 Capsella grandiflora
Cagra.16484s0001 2.0kb upstream 2.0kb upstream 880 false Scaffold16484: 2485-3364 Capsella grandiflora
Cagra.16484s0001 2.0kb downstream 2.0kb downstream 2484 true Scaffold16484: 1-2484 Capsella grandiflora
Cagra.16484s0001 2.0kb downstream 2.0kb downstream 1205 false Scaffold16484: 1-1205 Capsella grandiflora
Cagra.16484s0001 5.0kb upstream 5.0kb upstream 2159 true Scaffold16484: 1206-3364 Capsella grandiflora
Cagra.16484s0001 5.0kb upstream 5.0kb upstream 880 false Scaffold16484: 2485-3364 Capsella grandiflora
Cagra.16484s0001 5.0kb downstream 5.0kb downstream 2484 true Scaffold16484: 1-2484 Capsella grandiflora
Cagra.16484s0001 5.0kb downstream 5.0kb downstream 1205 false Scaffold16484: 1-1205 Capsella grandiflora
Cagra.16484s0001 10.0kb upstream 10.0kb upstream 2159 true Scaffold16484: 1206-3364 Capsella grandiflora
Cagra.16484s0001 10.0kb upstream 10.0kb upstream 880 false Scaffold16484: 2485-3364 Capsella grandiflora
Cagra.16484s0001 10.0kb downstream 10.0kb downstream 2484 true Scaffold16484: 1-2484 Capsella grandiflora
Cagra.16484s0001 10.0kb downstream 10.0kb downstream 1205 false Scaffold16484: 1-1205 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122332782 5261 Brassicaceae Singleton cluster - no MSA
123773814 5264 Brassicales-Malvales Singleton cluster - no MSA
124350701 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain