Protein Family : PIF1 helicase 124252774

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  150
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150 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29993.t000035 (1 of 1) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1) R. communis v0.1 1539   29993: 702462-704000
orange1.1g044416m.g (1 of 1) PF02689 - Helicase (Herpes_Helicase) C. sinensis v1.1 738   scaffold05930: 1-738
AT5G28780 (1 of 3) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1) A. thaliana TAIR10 1267   Chr5: 10812907-10814173
AT3G51700 (1 of 3) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1) A. thaliana TAIR10 1924   Chr3: 19179266-19181189
AT3G51690 (1 of 3) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1) A. thaliana TAIR10 1788   Chr3: 19176374-19178161
Thhalv10027535m.g (1 of 1) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) E. salsugineum v1.0 4549   scaffold_1: 17132774-17137322
Ciclev10003171m.g (1 of 5) KOG0987 - DNA helicase PIF1/RRM3 C. clementina v1.0 1662   scaffold_5: 28215100-28216761
Ciclev10003309m.g (1 of 5) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) C. clementina v1.0 2735   scaffold_5: 16959871-16962605
Ciclev10004019m.g (1 of 3) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. clementina v1.0 3845   scaffold_5: 39034382-39038226
Ciclev10023385m.g (1 of 3) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. clementina v1.0 5072   scaffold_3: 7580760-7585831
Ciclev10003437m.g (1 of 1) PF02689//PF05970 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) C. clementina v1.0 918   scaffold_5: 16958193-16959110
Ciclev10017725m.g (1 of 8) PF05970 - PIF1-like helicase (PIF1) C. clementina v1.0 1599   scaffold_2: 26590679-26592277
Ciclev10033859m.g (1 of 3) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. clementina v1.0 5924   scaffold_4: 5986464-5992387
Ciclev10033312m.g (1 of 1) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. clementina v1.0 6135   scaffold_4: 4307615-4313749
Thecc1EG001831 (1 of 1) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1) T. cacao v1.1 10905   scaffold_1: 9675740-9686644
Thecc1EG004365 (1 of 6) PF05970 - PIF1-like helicase (PIF1) T. cacao v1.1 6052   scaffold_1: 31210542-31216593
Thecc1EG016903 (1 of 1) PF05970//PF14214//PF16900 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) // Replication protein A OB domain (REPA_OB_2) T. cacao v1.1 11352   scaffold_4: 758591-769942
Thecc1EG026010 (1 of 6) PF05970 - PIF1-like helicase (PIF1) T. cacao v1.1 10403   scaffold_5: 36042779-36053181
Cagra.0296s0001 (1 of 4) KOG0987 - DNA helicase PIF1/RRM3 C. grandiflora v1.1 4601   Scaffold296: 4099-8699
Cagra.1043s0040 (1 of 2) PTHR10492:SF30 - PIF1 HELICASE C. grandiflora v1.1 3051   Scaffold1043: 137234-140284
Cagra.16484s0001 (1 of 12) PF05970 - PIF1-like helicase (PIF1) C. grandiflora v1.1 1279   Scaffold16484: 1206-2484
Cagra.14873s0001 (1 of 2) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. grandiflora v1.1 4806   Scaffold14873: 4642-9447
Cagra.23276s0001 (1 of 4) KOG0987 - DNA helicase PIF1/RRM3 C. grandiflora v1.1 2772   Scaffold23276: 3-2774
Cagra.22481s0001 (1 of 2) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. grandiflora v1.1 4127   Scaffold22481: 2191-6317
Cagra.18110s0002 (1 of 4) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) C. grandiflora v1.1 4673   Scaffold18110: 4629-9301
Brara.D00467 (1 of 7) PF02689//PF05970 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) B. rapa FPsc v1.3 1148   A04: 3483554-3484701
Brara.D00772 (1 of 22) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) B. rapa FPsc v1.3 6520   A04: 6621181-6627700
Brara.D00782 (1 of 18) KOG0987 - DNA helicase PIF1/RRM3 B. rapa FPsc v1.3 4259   A04: 6739345-6743603
Brara.D00757 (1 of 18) KOG0987 - DNA helicase PIF1/RRM3 B. rapa FPsc v1.3 13486   A04: 6494075-6507560
Brara.F03402 (1 of 22) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) B. rapa FPsc v1.3 4845   A06: 26505059-26509903

150 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29993.m001066 R. communis v0.1 124252774 PIF1 helicase 1 5268 Malvidae
orange1.1g044416m C. sinensis v1.1 124252774 PIF1 helicase 1 5268 Malvidae
AT3G51700.1 A. thaliana TAIR10 124252774 PIF1 helicase 3 5268 Malvidae
Ciclev10003171m C. clementina v1.0 124252774 PIF1 helicase 8 5268 Malvidae
Ciclev10033859m C. clementina v1.0 124252774 PIF1 helicase 8 5268 Malvidae
Thecc1EG004365t1 T. cacao v1.1 124252774 PIF1 helicase 4 5268 Malvidae
Brara.B02437.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.B02726.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.J01523.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.D00772.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.D00782.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.D00467.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.E02626.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.E01587.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.K01203.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.A01965.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.K00008.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.I02660.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Brara.H00848.1.p B. rapa FPsc v1.3 124252774 PIF1 helicase 40 5268 Malvidae
Bostr.22157s0116.1.p B. stricta v1.2 124252774 PIF1 helicase 20 5268 Malvidae
Bostr.15774s0014.1.p B. stricta v1.2 124252774 PIF1 helicase 20 5268 Malvidae
Bostr.15774s0119.1.p B. stricta v1.2 124252774 PIF1 helicase 20 5268 Malvidae
Bostr.0568s0360.1.p B. stricta v1.2 124252774 PIF1 helicase 20 5268 Malvidae
SapurV1A.0026s0310.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.0031s0270.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.1191s0030.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.0669s0130.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.0407s0250.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.0339s0180.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae
SapurV1A.0726s0060.1.p S. purpurea v1.0 124252774 PIF1 helicase 49 5268 Malvidae