Gene : Cagra.22481s0001 C. grandiflora v1.1
Defline:  (1 of 2) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  1
Name:  ? Cagra.22481s0001 Secondary Identifier:  ? PAC:28918732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22481s0001 0.5kb upstream 0.5kb upstream 4627 true Scaffold22481: 2191-6817 Capsella grandiflora
Cagra.22481s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold22481: 6318-6817 Capsella grandiflora
Cagra.22481s0001 0.5kb downstream 0.5kb downstream 4627 true Scaffold22481: 1691-6317 Capsella grandiflora
Cagra.22481s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold22481: 1691-2190 Capsella grandiflora
Cagra.22481s0001 1.0kb upstream 1.0kb upstream 5127 true Scaffold22481: 2191-7317 Capsella grandiflora
Cagra.22481s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold22481: 6318-7317 Capsella grandiflora
Cagra.22481s0001 1.0kb downstream 1.0kb downstream 5127 true Scaffold22481: 1191-6317 Capsella grandiflora
Cagra.22481s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold22481: 1191-2190 Capsella grandiflora
Cagra.22481s0001 2.0kb upstream 2.0kb upstream 6127 true Scaffold22481: 2191-8317 Capsella grandiflora
Cagra.22481s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold22481: 6318-8317 Capsella grandiflora
Cagra.22481s0001 2.0kb downstream 2.0kb downstream 6127 true Scaffold22481: 191-6317 Capsella grandiflora
Cagra.22481s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold22481: 191-2190 Capsella grandiflora
Cagra.22481s0001 5.0kb upstream 5.0kb upstream 9127 true Scaffold22481: 2191-11317 Capsella grandiflora
Cagra.22481s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold22481: 6318-11317 Capsella grandiflora
Cagra.22481s0001 5.0kb downstream 5.0kb downstream 6317 true Scaffold22481: 1-6317 Capsella grandiflora
Cagra.22481s0001 5.0kb downstream 5.0kb downstream 2190 false Scaffold22481: 1-2190 Capsella grandiflora
Cagra.22481s0001 10.0kb upstream 10.0kb upstream 11021 true Scaffold22481: 2191-13211 Capsella grandiflora
Cagra.22481s0001 10.0kb upstream 10.0kb upstream 6894 false Scaffold22481: 6318-13211 Capsella grandiflora
Cagra.22481s0001 10.0kb downstream 10.0kb downstream 6317 true Scaffold22481: 1-6317 Capsella grandiflora
Cagra.22481s0001 10.0kb downstream 10.0kb downstream 2190 false Scaffold22481: 1-2190 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122380275 5261 Brassicaceae View MSA
123802631 5264 Brassicales-Malvales View MSA
124299812 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain