Gene : Cagra.18110s0002 C. grandiflora v1.1
Defline:  (1 of 4) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  2
Name:  ? Cagra.18110s0002 Secondary Identifier:  ? PAC:28901349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18110s0002 0.5kb upstream 0.5kb upstream 5173 true Scaffold18110: 4129-9301 Capsella grandiflora
Cagra.18110s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold18110: 4129-4628 Capsella grandiflora
Cagra.18110s0002 0.5kb downstream 0.5kb downstream 5173 true Scaffold18110: 4629-9801 Capsella grandiflora
Cagra.18110s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold18110: 9302-9801 Capsella grandiflora
Cagra.18110s0002 1.0kb upstream 1.0kb upstream 5673 true Scaffold18110: 3629-9301 Capsella grandiflora
Cagra.18110s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold18110: 3629-4628 Capsella grandiflora
Cagra.18110s0002 1.0kb downstream 1.0kb downstream 5673 true Scaffold18110: 4629-10301 Capsella grandiflora
Cagra.18110s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold18110: 9302-10301 Capsella grandiflora
Cagra.18110s0002 2.0kb upstream 2.0kb upstream 6673 true Scaffold18110: 2629-9301 Capsella grandiflora
Cagra.18110s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold18110: 2629-4628 Capsella grandiflora
Cagra.18110s0002 2.0kb downstream 2.0kb downstream 6673 true Scaffold18110: 4629-11301 Capsella grandiflora
Cagra.18110s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold18110: 9302-11301 Capsella grandiflora
Cagra.18110s0002 5.0kb upstream 5.0kb upstream 9301 true Scaffold18110: 1-9301 Capsella grandiflora
Cagra.18110s0002 5.0kb upstream 5.0kb upstream 4628 false Scaffold18110: 1-4628 Capsella grandiflora
Cagra.18110s0002 5.0kb downstream 5.0kb downstream 7016 true Scaffold18110: 4629-11644 Capsella grandiflora
Cagra.18110s0002 5.0kb downstream 5.0kb downstream 2343 false Scaffold18110: 9302-11644 Capsella grandiflora
Cagra.18110s0002 10.0kb upstream 10.0kb upstream 9301 true Scaffold18110: 1-9301 Capsella grandiflora
Cagra.18110s0002 10.0kb upstream 10.0kb upstream 4628 false Scaffold18110: 1-4628 Capsella grandiflora
Cagra.18110s0002 10.0kb downstream 10.0kb downstream 7016 true Scaffold18110: 4629-11644 Capsella grandiflora
Cagra.18110s0002 10.0kb downstream 10.0kb downstream 2343 false Scaffold18110: 9302-11644 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122380204 5261 Brassicaceae View MSA
123802598 5264 Brassicales-Malvales View MSA
124350527 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain