Gene : Cagra.10221s0023 C. grandiflora v1.1
Defline:  (1 of 3) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  23
Name:  ? Cagra.10221s0023 Secondary Identifier:  ? PAC:28910378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10221s0023 0.5kb upstream 0.5kb upstream 2134 true Scaffold10221: 63692-65825 Capsella grandiflora
Cagra.10221s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold10221: 65326-65825 Capsella grandiflora
Cagra.10221s0023 0.5kb downstream 0.5kb downstream 2134 true Scaffold10221: 63192-65325 Capsella grandiflora
Cagra.10221s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold10221: 63192-63691 Capsella grandiflora
Cagra.10221s0023 1.0kb upstream 1.0kb upstream 2634 true Scaffold10221: 63692-66325 Capsella grandiflora
Cagra.10221s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold10221: 65326-66325 Capsella grandiflora
Cagra.10221s0023 1.0kb downstream 1.0kb downstream 2634 true Scaffold10221: 62692-65325 Capsella grandiflora
Cagra.10221s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold10221: 62692-63691 Capsella grandiflora
Cagra.10221s0023 2.0kb upstream 2.0kb upstream 2910 true Scaffold10221: 63692-66601 Capsella grandiflora
Cagra.10221s0023 2.0kb upstream 2.0kb upstream 1276 false Scaffold10221: 65326-66601 Capsella grandiflora
Cagra.10221s0023 2.0kb downstream 2.0kb downstream 3634 true Scaffold10221: 61692-65325 Capsella grandiflora
Cagra.10221s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold10221: 61692-63691 Capsella grandiflora
Cagra.10221s0023 5.0kb upstream 5.0kb upstream 2910 true Scaffold10221: 63692-66601 Capsella grandiflora
Cagra.10221s0023 5.0kb upstream 5.0kb upstream 1276 false Scaffold10221: 65326-66601 Capsella grandiflora
Cagra.10221s0023 5.0kb downstream 5.0kb downstream 6634 true Scaffold10221: 58692-65325 Capsella grandiflora
Cagra.10221s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold10221: 58692-63691 Capsella grandiflora
Cagra.10221s0023 10.0kb upstream 10.0kb upstream 2910 true Scaffold10221: 63692-66601 Capsella grandiflora
Cagra.10221s0023 10.0kb upstream 10.0kb upstream 1276 false Scaffold10221: 65326-66601 Capsella grandiflora
Cagra.10221s0023 10.0kb downstream 10.0kb downstream 11634 true Scaffold10221: 53692-65325 Capsella grandiflora
Cagra.10221s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold10221: 53692-63691 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369845 5261 Brassicaceae View MSA
123828786 5264 Brassicales-Malvales View MSA
124336685 5266 SBM View MSA
124252904 5268 Malvidae View MSA
124071725 5270 Rosid View MSA
123745197 5271 Pentapetalae View MSA
122794608 5272 Eudicot View MSA
122048508 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain