Gene : Cagra.15322s0006 C. grandiflora v1.1
Defline:  (1 of 1) KOG2610 - Uncharacterized conserved protein Genomic Order:  6
Name:  ? Cagra.15322s0006 Secondary Identifier:  ? PAC:28902480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15322s0006 0.5kb upstream 0.5kb upstream 3589 true Scaffold15322: 24347-27935 Capsella grandiflora
Cagra.15322s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold15322: 27436-27935 Capsella grandiflora
Cagra.15322s0006 0.5kb downstream 0.5kb downstream 3589 true Scaffold15322: 23847-27435 Capsella grandiflora
Cagra.15322s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold15322: 23847-24346 Capsella grandiflora
Cagra.15322s0006 1.0kb upstream 1.0kb upstream 4089 true Scaffold15322: 24347-28435 Capsella grandiflora
Cagra.15322s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold15322: 27436-28435 Capsella grandiflora
Cagra.15322s0006 1.0kb downstream 1.0kb downstream 4089 true Scaffold15322: 23347-27435 Capsella grandiflora
Cagra.15322s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold15322: 23347-24346 Capsella grandiflora
Cagra.15322s0006 2.0kb upstream 2.0kb upstream 5089 true Scaffold15322: 24347-29435 Capsella grandiflora
Cagra.15322s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold15322: 27436-29435 Capsella grandiflora
Cagra.15322s0006 2.0kb downstream 2.0kb downstream 5089 true Scaffold15322: 22347-27435 Capsella grandiflora
Cagra.15322s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold15322: 22347-24346 Capsella grandiflora
Cagra.15322s0006 5.0kb upstream 5.0kb upstream 8089 true Scaffold15322: 24347-32435 Capsella grandiflora
Cagra.15322s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold15322: 27436-32435 Capsella grandiflora
Cagra.15322s0006 5.0kb downstream 5.0kb downstream 8089 true Scaffold15322: 19347-27435 Capsella grandiflora
Cagra.15322s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold15322: 19347-24346 Capsella grandiflora
Cagra.15322s0006 10.0kb upstream 10.0kb upstream 13089 true Scaffold15322: 24347-37435 Capsella grandiflora
Cagra.15322s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold15322: 27436-37435 Capsella grandiflora
Cagra.15322s0006 10.0kb downstream 10.0kb downstream 13089 true Scaffold15322: 14347-27435 Capsella grandiflora
Cagra.15322s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold15322: 14347-24346 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364552 5261 Brassicaceae View MSA
123839920 5264 Brassicales-Malvales View MSA
124338528 5266 SBM View MSA
124240073 5268 Malvidae View MSA
124066695 5270 Rosid View MSA
123740616 5271 Pentapetalae View MSA
122790919 5272 Eudicot View MSA
122043704 5273 Angiosperm View MSA
121346225 5274 Embryophyte View MSA
123380350 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain