Gene : Cagra.15036s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31062:SF25 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED Genomic Order:  20
Name:  ? Cagra.15036s0020 Secondary Identifier:  ? PAC:28909099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0020 0.5kb upstream 0.5kb upstream 2232 true Scaffold15036: 88618-90849 Capsella grandiflora
Cagra.15036s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 90350-90849 Capsella grandiflora
Cagra.15036s0020 0.5kb downstream 0.5kb downstream 2232 true Scaffold15036: 88118-90349 Capsella grandiflora
Cagra.15036s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 88118-88617 Capsella grandiflora
Cagra.15036s0020 1.0kb upstream 1.0kb upstream 2732 true Scaffold15036: 88618-91349 Capsella grandiflora
Cagra.15036s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 90350-91349 Capsella grandiflora
Cagra.15036s0020 1.0kb downstream 1.0kb downstream 2732 true Scaffold15036: 87618-90349 Capsella grandiflora
Cagra.15036s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 87618-88617 Capsella grandiflora
Cagra.15036s0020 2.0kb upstream 2.0kb upstream 3732 true Scaffold15036: 88618-92349 Capsella grandiflora
Cagra.15036s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 90350-92349 Capsella grandiflora
Cagra.15036s0020 2.0kb downstream 2.0kb downstream 3732 true Scaffold15036: 86618-90349 Capsella grandiflora
Cagra.15036s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 86618-88617 Capsella grandiflora
Cagra.15036s0020 5.0kb upstream 5.0kb upstream 6732 true Scaffold15036: 88618-95349 Capsella grandiflora
Cagra.15036s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 90350-95349 Capsella grandiflora
Cagra.15036s0020 5.0kb downstream 5.0kb downstream 6732 true Scaffold15036: 83618-90349 Capsella grandiflora
Cagra.15036s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 83618-88617 Capsella grandiflora
Cagra.15036s0020 10.0kb upstream 10.0kb upstream 11732 true Scaffold15036: 88618-100349 Capsella grandiflora
Cagra.15036s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 90350-100349 Capsella grandiflora
Cagra.15036s0020 10.0kb downstream 10.0kb downstream 11732 true Scaffold15036: 78618-90349 Capsella grandiflora
Cagra.15036s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 78618-88617 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375103 5261 Brassicaceae View MSA
123837548 5264 Brassicales-Malvales View MSA
124344490 5266 SBM View MSA
124242017 5268 Malvidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain