Gene : Cagra.14522s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  6
Name:  ? Cagra.14522s0006 Secondary Identifier:  ? PAC:28914942
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14522s0006 0.5kb upstream 0.5kb upstream 2263 true Scaffold14522: 22173-24435 Capsella grandiflora
Cagra.14522s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold14522: 23936-24435 Capsella grandiflora
Cagra.14522s0006 0.5kb downstream 0.5kb downstream 2263 true Scaffold14522: 21673-23935 Capsella grandiflora
Cagra.14522s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold14522: 21673-22172 Capsella grandiflora
Cagra.14522s0006 1.0kb upstream 1.0kb upstream 2763 true Scaffold14522: 22173-24935 Capsella grandiflora
Cagra.14522s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold14522: 23936-24935 Capsella grandiflora
Cagra.14522s0006 1.0kb downstream 1.0kb downstream 2763 true Scaffold14522: 21173-23935 Capsella grandiflora
Cagra.14522s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold14522: 21173-22172 Capsella grandiflora
Cagra.14522s0006 2.0kb upstream 2.0kb upstream 3707 true Scaffold14522: 22173-25879 Capsella grandiflora
Cagra.14522s0006 2.0kb upstream 2.0kb upstream 1944 false Scaffold14522: 23936-25879 Capsella grandiflora
Cagra.14522s0006 2.0kb downstream 2.0kb downstream 3763 true Scaffold14522: 20173-23935 Capsella grandiflora
Cagra.14522s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold14522: 20173-22172 Capsella grandiflora
Cagra.14522s0006 5.0kb upstream 5.0kb upstream 3707 true Scaffold14522: 22173-25879 Capsella grandiflora
Cagra.14522s0006 5.0kb upstream 5.0kb upstream 1944 false Scaffold14522: 23936-25879 Capsella grandiflora
Cagra.14522s0006 5.0kb downstream 5.0kb downstream 6763 true Scaffold14522: 17173-23935 Capsella grandiflora
Cagra.14522s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold14522: 17173-22172 Capsella grandiflora
Cagra.14522s0006 10.0kb upstream 10.0kb upstream 3707 true Scaffold14522: 22173-25879 Capsella grandiflora
Cagra.14522s0006 10.0kb upstream 10.0kb upstream 1944 false Scaffold14522: 23936-25879 Capsella grandiflora
Cagra.14522s0006 10.0kb downstream 10.0kb downstream 11763 true Scaffold14522: 12173-23935 Capsella grandiflora
Cagra.14522s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold14522: 12173-22172 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366695 5261 Brassicaceae View MSA
123839267 5264 Brassicales-Malvales View MSA
124343542 5266 SBM View MSA
124238887 5268 Malvidae View MSA
124067619 5270 Rosid View MSA
123736820 5271 Pentapetalae View MSA
122786957 5272 Eudicot View MSA
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain