Gene : Cagra.15036s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31558:SF3 - CW14 PROTEIN Genomic Order:  5
Name:  ? Cagra.15036s0005 Secondary Identifier:  ? PAC:28909083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0005 0.5kb upstream 0.5kb upstream 3486 true Scaffold15036: 19257-22742 Capsella grandiflora
Cagra.15036s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 22243-22742 Capsella grandiflora
Cagra.15036s0005 0.5kb downstream 0.5kb downstream 3486 true Scaffold15036: 18757-22242 Capsella grandiflora
Cagra.15036s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 18757-19256 Capsella grandiflora
Cagra.15036s0005 1.0kb upstream 1.0kb upstream 3986 true Scaffold15036: 19257-23242 Capsella grandiflora
Cagra.15036s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 22243-23242 Capsella grandiflora
Cagra.15036s0005 1.0kb downstream 1.0kb downstream 3986 true Scaffold15036: 18257-22242 Capsella grandiflora
Cagra.15036s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 18257-19256 Capsella grandiflora
Cagra.15036s0005 2.0kb upstream 2.0kb upstream 4986 true Scaffold15036: 19257-24242 Capsella grandiflora
Cagra.15036s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 22243-24242 Capsella grandiflora
Cagra.15036s0005 2.0kb downstream 2.0kb downstream 4986 true Scaffold15036: 17257-22242 Capsella grandiflora
Cagra.15036s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 17257-19256 Capsella grandiflora
Cagra.15036s0005 5.0kb upstream 5.0kb upstream 7986 true Scaffold15036: 19257-27242 Capsella grandiflora
Cagra.15036s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 22243-27242 Capsella grandiflora
Cagra.15036s0005 5.0kb downstream 5.0kb downstream 7986 true Scaffold15036: 14257-22242 Capsella grandiflora
Cagra.15036s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 14257-19256 Capsella grandiflora
Cagra.15036s0005 10.0kb upstream 10.0kb upstream 12986 true Scaffold15036: 19257-32242 Capsella grandiflora
Cagra.15036s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 22243-32242 Capsella grandiflora
Cagra.15036s0005 10.0kb downstream 10.0kb downstream 12986 true Scaffold15036: 9257-22242 Capsella grandiflora
Cagra.15036s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 9257-19256 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378140 5261 Brassicaceae View MSA
123801756 5264 Brassicales-Malvales View MSA
124299025 5266 SBM View MSA
124250154 5268 Malvidae View MSA
124062593 5270 Rosid View MSA
123751029 5271 Pentapetalae View MSA
122786126 5272 Eudicot View MSA
122041786 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain