Gene : Cagra.13847s0001 C. grandiflora v1.1
Defline:  (1 of 1) 4.1.1.22 - Histidine decarboxylase / L-histidine carboxy-lyase Genomic Order:  1
Name:  ? Cagra.13847s0001 Secondary Identifier:  ? PAC:28906956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13847s0001 0.5kb upstream 0.5kb upstream 5872 true Scaffold13847: 937-6808 Capsella grandiflora
Cagra.13847s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13847: 937-1436 Capsella grandiflora
Cagra.13847s0001 0.5kb downstream 0.5kb downstream 5872 true Scaffold13847: 1437-7308 Capsella grandiflora
Cagra.13847s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13847: 6809-7308 Capsella grandiflora
Cagra.13847s0001 1.0kb upstream 1.0kb upstream 6372 true Scaffold13847: 437-6808 Capsella grandiflora
Cagra.13847s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13847: 437-1436 Capsella grandiflora
Cagra.13847s0001 1.0kb downstream 1.0kb downstream 6372 true Scaffold13847: 1437-7808 Capsella grandiflora
Cagra.13847s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13847: 6809-7808 Capsella grandiflora
Cagra.13847s0001 2.0kb upstream 2.0kb upstream 6808 true Scaffold13847: 1-6808 Capsella grandiflora
Cagra.13847s0001 2.0kb upstream 2.0kb upstream 1436 false Scaffold13847: 1-1436 Capsella grandiflora
Cagra.13847s0001 2.0kb downstream 2.0kb downstream 7372 true Scaffold13847: 1437-8808 Capsella grandiflora
Cagra.13847s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13847: 6809-8808 Capsella grandiflora
Cagra.13847s0001 5.0kb upstream 5.0kb upstream 6808 true Scaffold13847: 1-6808 Capsella grandiflora
Cagra.13847s0001 5.0kb upstream 5.0kb upstream 1436 false Scaffold13847: 1-1436 Capsella grandiflora
Cagra.13847s0001 5.0kb downstream 5.0kb downstream 10372 true Scaffold13847: 1437-11808 Capsella grandiflora
Cagra.13847s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold13847: 6809-11808 Capsella grandiflora
Cagra.13847s0001 10.0kb upstream 10.0kb upstream 6808 true Scaffold13847: 1-6808 Capsella grandiflora
Cagra.13847s0001 10.0kb upstream 10.0kb upstream 1436 false Scaffold13847: 1-1436 Capsella grandiflora
Cagra.13847s0001 10.0kb downstream 10.0kb downstream 12318 true Scaffold13847: 1437-13754 Capsella grandiflora
Cagra.13847s0001 10.0kb downstream 10.0kb downstream 6946 false Scaffold13847: 6809-13754 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332552 5261 Brassicaceae Singleton cluster - no MSA
123839824 5264 Brassicales-Malvales View MSA
124345769 5266 SBM View MSA
124238006 5268 Malvidae View MSA
124067383 5270 Rosid View MSA
123736522 5271 Pentapetalae View MSA
122789844 5272 Eudicot View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain