Gene : Cagra.13406s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11071:SF213 - PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  3
Name:  ? Cagra.13406s0003 Secondary Identifier:  ? PAC:28901264
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13406s0003 0.5kb upstream 0.5kb upstream 5074 true Scaffold13406: 10749-15822 Capsella grandiflora
Cagra.13406s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13406: 15323-15822 Capsella grandiflora
Cagra.13406s0003 0.5kb downstream 0.5kb downstream 5074 true Scaffold13406: 10249-15322 Capsella grandiflora
Cagra.13406s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13406: 10249-10748 Capsella grandiflora
Cagra.13406s0003 1.0kb upstream 1.0kb upstream 5574 true Scaffold13406: 10749-16322 Capsella grandiflora
Cagra.13406s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13406: 15323-16322 Capsella grandiflora
Cagra.13406s0003 1.0kb downstream 1.0kb downstream 5574 true Scaffold13406: 9749-15322 Capsella grandiflora
Cagra.13406s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13406: 9749-10748 Capsella grandiflora
Cagra.13406s0003 2.0kb upstream 2.0kb upstream 6574 true Scaffold13406: 10749-17322 Capsella grandiflora
Cagra.13406s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13406: 15323-17322 Capsella grandiflora
Cagra.13406s0003 2.0kb downstream 2.0kb downstream 6574 true Scaffold13406: 8749-15322 Capsella grandiflora
Cagra.13406s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13406: 8749-10748 Capsella grandiflora
Cagra.13406s0003 5.0kb upstream 5.0kb upstream 9574 true Scaffold13406: 10749-20322 Capsella grandiflora
Cagra.13406s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13406: 15323-20322 Capsella grandiflora
Cagra.13406s0003 5.0kb downstream 5.0kb downstream 9574 true Scaffold13406: 5749-15322 Capsella grandiflora
Cagra.13406s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13406: 5749-10748 Capsella grandiflora
Cagra.13406s0003 10.0kb upstream 10.0kb upstream 14008 true Scaffold13406: 10749-24756 Capsella grandiflora
Cagra.13406s0003 10.0kb upstream 10.0kb upstream 9434 false Scaffold13406: 15323-24756 Capsella grandiflora
Cagra.13406s0003 10.0kb downstream 10.0kb downstream 14574 true Scaffold13406: 749-15322 Capsella grandiflora
Cagra.13406s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold13406: 749-10748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
122364287 5261 Brassicaceae View MSA
123828595 5264 Brassicales-Malvales View MSA
124345177 5266 SBM View MSA
124252700 5268 Malvidae View MSA
124067413 5270 Rosid View MSA
123745909 5271 Pentapetalae View MSA
122789860 5272 Eudicot View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain